DTI-TK

Hi Gary! I know, it's an ancient thread, but as I have the same issue and am looking for a

Hi Lara, It seems to be working just fine for me. I can access the link you sent (pdf attached, in

Hi Kyle, Yes, this is possible although this feature is not currently made available through the

Hi Kyle, Thanks for your interest in using DTI-TK. I'm pleased to report that the site is now

Hi Peng, If you need to do intra-subject alignment at the first stage, you may find the new DTI-TK

Dear all, Pleased to announce the availability of several addons for DTI-TK we have developed. 1) A

Thanks Manuel. I was just looking into it this morning and came to the same conclusion. It looks like

Hi Simon, Indeed, we don't include lower portion of the brain stem because there we can no longer

Hello all, I was having a similar problem as the one Molly and David described above. My processing

Hi Ariadna, Your population -> atlas transformation appears to be the correct size, but your

Hi Arnold, While it is possible to convert the format, the real difficulty lies in different

Hi Ariadna, The files to use are the ones ending with *diffeo.nii.gz. Have you taken a look at these

Hi Ariadna, See my comments below. Gary On Sat, Sep 28, 2019 at 9:41 AM Ariadna Albajara Sáenz <

Hi All, To run DTITK in parallel we are using HTCondor. HTCondor has its own version of qsub called

Hi Manuel and Jeff, Thanks for reviving this thread. Note that cmrep is a 3rd party tool that DTI-TK

Hi, I am currently trying to compile cm-rep using cmake but am running into an assortment of errors.

Dear Gary, we are currently working on a DTI analysis of a subsample of the eNKI dataset. We

Hi, I am currently working on filtering a brain tractography using TractTool. Instructions in "

Following the "Building your own TSA template" tutorial I generated the brain tractography

Apologies. Indeed that is an outdated command. I have updated the page just now to reflect the new

Dear Gary and DTI_TK experts, I have been trying to work out the longitudinal DTI_TK proprecessing

The basic idea is presented here: http://dti-tk.sourceforge.net/pmwiki/pmwiki.php?n=Documentation.

Thanks Gary. Claire On Saturday, April 14, 2018 at 2:04:44 AM UTC+10, Gary wrote: Hi Claire, All the

Hi Duncan, This problem often occurs near the top and/or bottom part of the volumes. The deformation

Hi Gary, Indeed, the forum i was targeting is still down, and i posted here by mistake, my apologies.

Hi Nicola, The website is back now. Apparently the site was being migrated over the last couple of

I ran into the following error while running cmrep_vskel step from TSA Advanced tutorial: TSAtry]$ ~/

Hello experts, I was wondering if is it possible to use another maps for the TSA, not derived from a

Hi Gary, I've been trying to compile DTITK code on a MacOS. I've already built ITK and VTK in

Hi, The dti_warp_to_template script calls dfRightComposeAffine and then deformationSymTensor3DVolume.