[Dspace-tech] Problem with ant fresh_install

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MJGACTO

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Aug 24, 2015, 12:16:21 PM8/24/15
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I try to install dspace but I have problem during the execution
of "ant fresh_install". I use Suse 9 and postgresql 7.3.4
When I run ant fresh_install I obtain this:

space@linux:~> ant fresh_install
Buildfile: build.xml

update:
[exec] /bin/rm: cannot remove `/dspace/jsp/WEB-INF/lib': Is a
directory
[exec] Result: 1
[exec] /bin/ln: `/dspace/jsp/WEB-INF/lib/lib': File exists
[exec] Result: 1

install_code:

setup_database:
[java] 2004-03-08 12:08:46,985 INFO
org.dspace.storage.rdbms.InitializeDatabase @ Initializing Database
[java] 2004-03-08 12:08:47,108 FATAL
org.dspace.storage.rdbms.InitializeDatabase @ Caught exception:
[java] org.apache.commons.dbcp.DbcpException: Connection refused.
Check that the hostname and port are correct and that the postmaster
is accepting TCP/IP connections.
[java] at
org.apache.commons.dbcp.DriverManagerConnectionFactory.createConnection
(DriverManagerConnectionFactory.java:101)
[java] at
org.apache.commons.dbcp.PoolableConnectionFactory.makeObject
(PoolableConnectionFactory.java:184)
[java] at
org.apache.commons.pool.impl.GenericObjectPool.borrowObject(Unknown
Source)
[java] at org.apache.commons.dbcp.PoolingDriver.connect
(PoolingDriver.java:146)
[java] at java.sql.DriverManager.getConnection
(DriverManager.java:512)
[java] at java.sql.DriverManager.getConnection
(DriverManager.java:193)
[java] at
org.dspace.storage.rdbms.DatabaseManager.getConnection
(DatabaseManager.java:382)
[java] at org.dspace.storage.rdbms.DatabaseManager.loadSql
(DatabaseManager.java:668)
[java] at org.dspace.storage.rdbms.InitializeDatabase.main
(InitializeDatabase.java:76)
[java] Caused by: Connection refused. Check that the hostname and
port are correct and that the postmaster is accepting TCP/IP
connections.
[java] at
org.postgresql.jdbc1.AbstractJdbc1Connection.openConnection
(AbstractJdbc1Connection.java:167)
[java] at org.postgresql.Driver.connect(Driver.java:122)
[java] at java.sql.DriverManager.getConnection
(DriverManager.java:512)
[java] at java.sql.DriverManager.getConnection
(DriverManager.java:171)
[java] at
org.apache.commons.dbcp.DriverManagerConnectionFactory.createConnection
(DriverManagerConnectionFactory.java:95)
[java] ... 8 more

BUILD FAILED
file:/dspace/build.xml:220: Java returned: 1

Total time: 1 second

Anyone have any ideas how I can solve this and know what exactly Im
doing wrong?


Best regards

Maria Jose




Joseph Yi

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Aug 24, 2015, 12:39:47 PM8/24/15
to MJGACTO, dspac...@lists.sourceforge.net
Did you turn on TCP/IP connections in Postgres? You
need to modify the $PGSQL/data/postgresql.conf file
and add or edit: tcpip_socket=true

restart postgres and try again

-j yi
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Francisco Andrés Bressan

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Aug 24, 2015, 2:28:50 PM8/24/15
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Hello all,
I have a problem executing ant fresh_install

Buildfile: build.xml

compile:

install_code:

build_wars:

init_configs:

setup_database:
[java] 2005-04-13 15:08:46,658 INFO org.dspace.storage.rdbms.InitializeDat
abase @ Initializing Database
[java] 2005-04-13 15:08:46,991 WARN org.dspace.storage.rdbms.DatabaseManag
er @ Got SQL Exception: java.sql.SQLException: ERROR: function "getnextid"
already exists with same argument types

[java] java.sql.SQLException: ERROR: function "getnextid" already exists w
ith same argument types

[java] at org.postgresql.Connection.ExecSQL(Connection.java:538)
[java] at org.postgresql.jdbc2.Statement.execute(Statement.java:296)
[java] at org.apache.commons.dbcp.DelegatingStatement.execute(Delegatin
.....................
any suggestion?
Tanks

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Gerson Galang

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Aug 24, 2015, 2:28:56 PM8/24/15
to dspac...@lists.sourceforge.net, David Little
Hi,

I've been trying to get David Littles dspace-srb integrator application
to work on my dspace install but I had a problem when I tried committing
my submission to the archive. This is the message I had on my web browser.




Internal System Error

Oops! The system has experienced an internal error. This is our fault,
please pardon our dust during these early stages of the DSpace system!

The system has logged this error. Please try to do what you were doing
again, and if the problem persists, please contact us so we can fix the
problem




Please note that my system is now trying to store the submitted files on
my SRB server. Here's also what I have in my dspace log:

-- Method: POST
-- Parameters were:
-- submit_approve: "Commit to Archive"
-- workflow_id: "5"
-- step: "3"

java.io.IOException: Lock obtain timed out
at org.apache.lucene.store.Lock.obtain(Lock.java:97)
at org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:173)
at org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:151)
at org.dspace.search.DSIndexer.openIndex(DSIndexer.java:212)
at org.dspace.search.DSIndexer.indexContent(DSIndexer.java:83)
at org.dspace.content.InstallItem.installItem(InstallItem.java:187)
at org.dspace.content.InstallItem.installItem(InstallItem.java:210)
at org.dspace.content.InstallItem.installItem(InstallItem.java:77)
at
org.dspace.workflow.WorkflowManager.archive(WorkflowManager.java:578)
at
org.dspace.workflow.WorkflowManager.doState(WorkflowManager.java:530)
at
org.dspace.workflow.WorkflowManager.advance(WorkflowManager.java:320)
at
org.dspace.app.webui.servlet.MyDSpaceServlet.processPerformTask(MyDSpaceServlet.java:444)
at
org.dspace.app.webui.servlet.MyDSpaceServlet.doDSPost(MyDSpaceServlet.java:128)
at
org.dspace.app.webui.servlet.DSpaceServlet.processRequest(DSpaceServlet.java:153)
at
org.dspace.app.webui.servlet.DSpaceServlet.doPost(DSpaceServlet.java:110)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:760)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:853)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:247)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193)
at
org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:105)
at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:213)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:193)
at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:256)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643)
at
org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480)
at
org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643)
at
org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480)
at
org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995)
at
org.apache.catalina.core.StandardContext.invoke(StandardContext.java:2422)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:180)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643)
at
org.apache.catalina.valves.ErrorDispatcherValve.invoke(ErrorDispatcherValve.java:171)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641)
at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:163)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:641)
at
org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480)
at
org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995)
at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:174)
at
org.apache.catalina.core.StandardPipeline$StandardPipelineValveContext.invokeNext(StandardPipeline.java:643)
at
org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:480)
at
org.apache.catalina.core.ContainerBase.invoke(ContainerBase.java:995)
at
org.apache.coyote.tomcat4.CoyoteAdapter.service(CoyoteAdapter.java:199)
at
org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:828)
at
org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.processConnection(Http11Protocol.java:700)
at
org.apache.tomcat.util.net.TcpWorkerThread.runIt(PoolTcpEndpoint.java:584)
at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(ThreadPool.java:683)
at java.lang.Thread.run(Thread.java:534)


Do you have an idea on what went wrong?

Thanks,
Gerson

Gerson Galang

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Aug 24, 2015, 2:28:56 PM8/24/15
to dspac...@lists.sourceforge.net, David Little

r.d....@ed.ac.uk

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Aug 24, 2015, 2:28:58 PM8/24/15
to Francisco Andrés Bressan, dspac...@lists.sourceforge.net
Hi Francisco,

Is this 1.3 alpha 1?

The fresh_install option should only be used when you have no DSpace instance
installed and a blank dspace database. The output from ant indicates that no
code has been compiled (or there would be messages) or copied into location, so
there seems to already be code in place. Instead, use ant update and apply the
relevant schema update patch as per the upgrade instructions.

Cheers,

Richard
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--
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-------
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Systems Developer A crash reduces
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Theses Alive! project to a simple stone

e: r.d....@ed.ac.uk
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David Little

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Aug 24, 2015, 2:29:06 PM8/24/15
to dspac...@lists.sourceforge.net, gerson...@adelaide.edu.au, Chris Frymann, Robert Dias
Gerson -- For your SRB 3.3 I suggest you get DSpace 1.3alpha1 (which has the SRB/registration mods fully integrated into the DSpace code) but use your 3.3-compatible version of jargon.jar.

Regarding the problem you describe below: Since I see no mention of BitstreamStorageManager in your stack trace dump, I don't think there is an issue with DSpace writing to SRB. I do see mention of Lucene and locks. I hope someone else will be able to help but I have found the need to run bin/index-all sometimes to straighten out indexing issues.

I hope this helps.

David Little
Programmer/Developer
Biomedical Informatics Research Network - Coordinating Center
University of California at San Diego
drli...@ucsd.edu
858 822-0742



Date: Thu, 14 Apr 2005 12:52:51 +0930
From: Gerson Galang <gerson...@adelaide.edu.au>
To: dspac...@lists.sourceforge.net
Cc: David Little <drli...@library.ucsd.edu>
Subject: [Dspace-tech] commit to archive problem

Scott Yeadon

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Aug 24, 2015, 2:29:09 PM8/24/15
to gerson...@adelaide.edu.au, dspac...@lists.sourceforge.net
Hi Gerson,

See https://sourceforge.net/mailarchive/message.php?msg_id=10460990, maybe just a lucene lockfile that needs blowing away (index may have been in use at the time, or an aborted index-all?)

Scott.


Message: 4
Date: Thu, 14 Apr 2005 08:09:52 -0700
From: David Little <drli...@ucsd.edu>
To: dspac...@lists.sourceforge.net, gerson...@adelaide.edu.au
CC: Chris Frymann <cfry...@ucsd.edu>, Robert Dias <rd...@ucsd.edu>
Subject: [Dspace-tech] Re: commit to archive problem
--__--__--



Mika Stenberg

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Aug 24, 2015, 2:54:51 PM8/24/15
to dspac...@lists.sourceforge.net
Hi,

Im trying to install Dspace version 1.3 Beta.
While installing I get the following errors, any idea where is the problem?

Im using Java 1.4.2 on Red Hat Linux Rawhide 3.5ssa-48.


Thanks,
-Mika
---

ant fresh_install


Buildfile: build.xml

compile:
[javac] Compiling 136 source files to
/home/eurea/dspace-1.2.2-source/build/classes
[javac]
/home/eurea/dspace-1.2.2-source/src/org/dspace/app/mediafilter/HTMLFilter.ja
va:43: error: Class or interface `javax.swing.text.html.HTMLEditorKit' not
found in import.
[javac] import javax.swing.text.html.HTMLEditorKit;
[javac] ^
[javac]
/home/eurea/dspace-1.2.2-source/src/org/dspace/app/mediafilter/HTMLFilter.ja
va:100: error: Type `HTMLEditorKit' not found in the declaration of the
local variable `kit'.
[javac] HTMLEditorKit kit = new HTMLEditorKit();
[javac] ^
[javac]
/home/eurea/dspace-1.2.2-source/src/org/dspace/app/mediafilter/JPEGFilter.ja
va:46: error: Class or interface `javax.imageio.ImageIO' not found in
import.
[javac] import javax.imageio.ImageIO;
[javac] ^
[javac]
/home/eurea/dspace-1.2.2-source/src/org/dspace/app/webui/servlet/admin/ItemM
apServlet.java:0: internal compiler error: Segmentation fault
[javac] Please submit a full bug report,
[javac] with preprocessed source if appropriate.
[javac] See <URL:http://bugzilla.redhat.com/bugzilla/> for instructions.

BUILD FAILED
file:/home/eurea/dspace-1.2.2-source/build.xml:109: Compile failed; see the
compiler error output for details.


Jim Downing

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Aug 24, 2015, 2:55:00 PM8/24/15
to dspac...@lists.sourceforge.net
Hi Mika,

On Fri, 2005-07-08 at 15:57 +0300, Mika Stenberg wrote:
> ediafilter/HTMLFilter.ja
> va:43: error: Class or interface `javax.swing.text.html.HTMLEditorKit' not
> found in import.
> [javac] import javax.swing.text.html.HTMLEditorKit;
> [javac] ^
> [javac]
> /home/eurea/dspace-1.2.2-source/src/org/dspace/app/mediafilter/HTMLFilter.ja
> va:100: error: Type `HTMLEditorKit' not found in the declaration of the
> local variable `kit'.
> [javac] HTMLEditorKit kit = new HTMLEditorKit();
> [javac] ^
> [javac]
> /home/eurea/dspace-1.2.2-source/src/org/dspace/app/mediafilter/JPEGFilter.ja
> va:46: error: Class or interface `javax.imageio.ImageIO' not found in
> import.
> [javac] import javax.imageio.ImageIO;
> [javac] ^

Try: - http://sourceforge.net/mailarchive/message.php?msg_id=10778767

Best regards,
jim
--
Jim Downing <oj...@cam.ac.uk>
DSpace@Cambridge

Jayan Chirayath Kurian

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Aug 25, 2015, 11:05:19 AM8/25/15
to thandu...@yahoo.com, dspac...@lists.sourceforge.net

Hi!

this link may be of help. Probably it could be because of the PATH variable.
http://ardb4.ncsi.iisc.ernet.in/dspace/dspacewindows.htm

Jayan

-----Original Message-----
From: dspace-te...@lists.sourceforge.net on behalf of thandu venkat narayana
Sent: Sat 8/9/2008 8:20 AM
To: dspac...@lists.sourceforge.net
Subject: Re: [Dspace-tech] Problem with ant fresh_install

Dear All,
I installed all required software's for Dspace, but at the time of ant fresh_install I am facing the problem. errer report is : build fail build.xml dos not exist.

Pl help any one
Thanks
Venkat Narayana
Asst Librarian
S.V.Engineeirng College
Suryapet


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Claudia Juergen

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Aug 25, 2015, 11:05:24 AM8/25/15
to thandu...@yahoo.com, dspac...@lists.sourceforge.net
Hi Venkat,

seems as if you are not running the ant command from the right directory.

Which version are you trying to install?

cheers

Claudia


> Dear All,
> I installed all required software's for Dspace, but at the time of ant
> fresh_install I am facing the problem. errer report is : build fail
> build.xml dos not exist.
> Â
> Pl help any one
> Thanks
> Venkat Narayana
> Asst Librarian
> S.V.Engineeirng College
> Suryapet
>
>
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Kieffer, Paul

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Aug 25, 2015, 11:05:35 AM8/25/15
to sujat...@yahoo.com, dspac...@lists.sourceforge.net, thandu...@yahoo.com

Sounds more useful than the error I am receiving… and I am in the correct directory.

 

[dspace@dspace dspace-1.5.0-build.dir]$ ant fresh_install

Buildfile: build.xml

 

init_installation:

 

BUILD FAILED

/ds/dspace-1.5.0-release/dspace/target/dspace-1.5.0-build.dir/build.xml:325: Directory /dspace/bin creation was not successful for an unknown reason

 

Total time: 0 seconds

[dspace@dspace dspace-1.5.0-build.dir]

 

Any ideas?

 

Thanks,

Paul Kieffer

 

From: dspace-te...@lists.sourceforge.net [mailto:dspace-te...@lists.sourceforge.net] On Behalf Of sujata santosh
Sent: Monday, August 11, 2008 1:43 AM
To: dspac...@lists.sourceforge.net
Cc: thandu...@yahoo.com
Subject: Re: [Dspace-tech] Problem with ant fresh_install

 

Hi,

 

If you get build.xml does not exist, it means you are not running the ant from the directory where you have dspace source unzipped.

 

Please give dir command and check whether the build.xml file is in the directory you are running ant.

 

Thanks,

Sujata Santosh

 

-----Original Message-----
From: dspace-te...@lists.sourceforge.net on behalf of thandu venkat narayana
Sent: Sat 8/9/2008 8:20 AM
To: dspac...@lists.sourceforge.net
Subject: Re: [Dspace-tech] Problem with ant fresh_install

Dear All,
I installed all required software's for Dspace, but at the time of ant fresh_install I am facing the problem. errer report is : build fail build.xml dos not exist.

Pl help any one
Thanks
Venkat Narayana
Asst Librarian
S.V.Engineeirng College
Suryapet


      Unlimited freedom, unlimited storage. Get it now, on http://help.yahoo.com/l/in/yahoo/mail/yahoomail/tools/tools-08.html/

sujata santosh

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Aug 25, 2015, 12:26:35 PM8/25/15
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shiva kumara

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Aug 26, 2015, 9:35:39 AM8/26/15
to dspac...@lists.sourceforge.net, dl...@drtc.isibang.ac.in, Lewatle Phaladi, a...@drtc.isibang.ac.in, Dennis Tobar Calderón, Ivan Masár

Hi all

This is from Shivakumara RM, working as librarian in Bangalore. I am trying to install Dspace 1.7.0 on Windows Platform. I facing following problem during the command running ant fresh_install

Kindly let me know the solution to the below problem.

 

 

C:\dspace-1.7.0-src-release\dspace\target\dspace-1.7.0-build.dir> ant fresh_install

Build file: C:\dspace-1.7.0-src-release\dspace\target\dspace-1.7.0-build.dir\build.xml

init_installation:

 

init_configs:

 

test_database:

      [java] 2012-07-04 15:11:10,171 INFO  

org.dspace.core.ConfigurationManager @ Loading system provided config

property (-Ddspace.configuration): config/dspace.cfg

      [java] 2012-07-04 15:11:10,187 INFO 

org.dspace.core.ConfigurationManager @ Using default log4j provided log

configuration,if unintended, check your dspace.cfg for (log.init.config)

      [java]

      [java] Attempting to connect to database:

      [java]  - URL: jdbc:postgresql://localhost:5432/dspace

      [java]  - Driver: org.postgresql.Driver

      [java]  - Username: dspace

      [java]  - Password: dspace

      [java]  - Schema: null

      [java]

      [java] Testing connection...

      [java]

      [java] Error:

      [java]  - org.postgresql.util.PSQLException: Protocol error. Session setup failed

      [java]

      [java] Please see the DSpace documentation for assistance.

      [java]

 

BUILD FAILED

C:\dspace-1.7.0-src-release\dspace\target\dspace-1.7.0-build.dir\build.xml:747:Java returned: 1

Total time: 1 second


--
Thanking you,
Shivakumara RM
http://sites.google.com/site/aigslibrary
https://sites.google.com/site/shivakumararm/


helix84

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Aug 26, 2015, 9:35:39 AM8/26/15
to shiva kumara, dspac...@lists.sourceforge.net
On Wed, Jul 4, 2012 at 12:24 PM, shiva kumara <shiv...@gmail.com> wrote:
> This is from Shivakumara RM, working as librarian in Bangalore. I am trying
> to install Dspace 1.7.0 on Windows Platform. I facing following problem
> during the command running ant fresh_install
>
> Kindly let me know the solution to the below problem.

Hi Shivakumara,

ant here is trying to connect to the database you specified in
dspace.cfg (you can see the URL, login and password it's trying) and
it fails to connect. There are two common reasons for that:
a) You didn't install or configure your database yet.
b) You provided wrong information about the database in dspace.cfg

Regards,
~~helix84

shiva kumara

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Aug 26, 2015, 9:35:41 AM8/26/15
to hel...@centrum.sk, dspac...@lists.sourceforge.net
Hi helix84,
 
Thank you very much for quick response, I have attached dspace.cfg file for your kind suggestion to enlighten me about said problem.
 
Kindly do find an attachment.

Regards
 
Shivakumara RM
dspace.cfg

helix84

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Aug 26, 2015, 9:35:41 AM8/26/15
to shiva kumara, dspac...@lists.sourceforge.net
On Wed, Jul 4, 2012 at 12:56 PM, shiva kumara <shiv...@gmail.com> wrote:
> Thank you very much for quick response, I have attached dspace.cfg file for
> your kind suggestion to enlighten me about said problem.

Thanks, that is not necessary, I already had all needed information
from the first message. If you didn't yet install Postgres, you have
to install it. If you did, you have to set up a database and fill in
the configuration info into dspace.cfg.

You should follow the steps in the Installation documentation if you're lost:
https://wiki.duraspace.org/display/DSDOC18/Installation

Regards,
~~helix84

helix84

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Aug 26, 2015, 9:35:43 AM8/26/15
to shiva kumara, dspac...@lists.sourceforge.net
On Wed, Jul 4, 2012 at 12:59 PM, helix84 <hel...@centrum.sk> wrote:
> You should follow the steps in the Installation documentation if you're lost:
> https://wiki.duraspace.org/display/DSDOC18/Installation

Definitely do follow the official documentation, but you can also look
at some unoffcial docs which may provide more context, e.g. about
Postgres. Just google for "DSpace installation windows". Here's a nice
example:

http://ir.inflibnet.ac.in/dxml/bitstream/handle/1944/1590/Installing%20DSpace%20on%20Windows.pdf

Regards,
~~helix84

Fahad

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May 9, 2016, 1:22:34 PM5/9/16
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Hi ,

I am trying to install Dspace software and have an issue of DSpace software when I do ant fresh_install, have an error below:

BUILD FAILED

C:\dspace-5.4-src-release\dspace\target\dspace-installer\build.xml:797: Java returned: 1

 

Could you please help me that what is the problem? I have attached a file for more clarify error.

 

Thanks

dspace error.jpg

fahad.librarian

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May 10, 2016, 11:54:10 AM5/10/16
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dspace error.jpg
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