Internal Server Error in DSpace 6 /jspui/tools/collection-wizard

Genzmehr, Matthias

unread,

Mar 24, 2017, 7:48:09 AM3/24/17

to dspac...@googlegroups.com

Hi DSpacer’s,

I’m new to DSpace and i’m running DSpace 6.0 on Debian 4.9.13 with Tomcat 8.5.9 and PostgreSQL 9.4

Most seem’s to work perfect but i’m running into an Internal Server Error when I’m trying to create a new collection (/jspui/tools/collection-wizard).

It seems that DSpace is creating a StackOverflow caused by an endless loop in the recursive method

org.dspace.eperson.GroupServiceImpl.getChildren(GroupServiceImpl.java:642)

The dspace.log is attached below.

Do you have any ideas how to fix that?

dspace.log:

2017-03-24 12:14:31,324 INFO org.dspace.authenticate.PasswordAuthentication @ anonymous:session_id=790DE4F13AC2591C85D0037655D1CFAE:ip_addr=134.93.236.34:authenticate:attempting password auth of user=m.gen...@ub.uni-mainz.de

2017-03-24 12:14:31,328 INFO org.dspace.authenticate.PasswordAuthentication @ m.gen...@ub.uni-mainz.de:session_id=790DE4F13AC2591C85D0037655D1CFAE:ip_addr=134.93.236.34:authenticate:type=PasswordAuthentication

2017-03-24 12:14:31,328 INFO org.dspace.eperson.EPersonServiceImpl @ m.gen...@ub.uni-mainz.de:session_id=790DE4F13AC2591C85D0037655D1CFAE:ip_addr=134.93.236.34:update_eperson:eperson_id=182d7662-456c-45de-92a3-29bbe763bf96

2017-03-24 12:14:31,339 INFO org.dspace.app.webui.servlet.PasswordServlet @ m.gen...@ub.uni-mainz.de:session_id=790DE4F13AC2591C85D0037655D1CFAE:ip_addr=134.93.236.34:login:type=explicit

2017-03-24 12:14:31,451 INFO org.dspace.app.webui.servlet.MyDSpaceServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_mydspace:

2017-03-24 12:14:48,114 INFO org.dspace.app.webui.servlet.CommunityListServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_community_list:

2017-03-24 12:14:48,264 INFO org.dspace.app.webui.servlet.RetrieveServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=b90f958c-4fe4-40e8-8c0a-362d989c1e6f

2017-03-24 12:14:48,264 INFO org.dspace.usage.LoggerUsageEventListener @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=b90f958c-4fe4-40e8-8c0a-362d989c1e6f

2017-03-24 12:14:48,266 INFO org.dspace.app.webui.servlet.RetrieveServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=517f9339-f71d-4173-9a0d-290d3497366a

2017-03-24 12:14:48,267 INFO org.dspace.usage.LoggerUsageEventListener @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=517f9339-f71d-4173-9a0d-290d3497366a

2017-03-24 12:14:52,621 INFO org.dspace.app.webui.servlet.HandleServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_community:community_id=45b4eb45-3998-4d7a-b5d2-e5a5717c16b9

2017-03-24 12:14:52,622 INFO org.dspace.browse.BrowseEngine @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:browse_mini:

2017-03-24 12:14:52,635 INFO org.dspace.app.webui.discovery.DiscoverUtility @ facets for scope, org.dspace.content.Community@b8825798: 4

2017-03-24 12:14:52,664 INFO org.dspace.usage.LoggerUsageEventListener @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_community:community_id=45b4eb45-3998-4d7a-b5d2-e5a5717c16b9

2017-03-24 12:14:52,922 INFO org.dspace.app.webui.servlet.RetrieveServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=517f9339-f71d-4173-9a0d-290d3497366a

2017-03-24 12:14:52,922 INFO org.dspace.usage.LoggerUsageEventListener @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=517f9339-f71d-4173-9a0d-290d3497366a

2017-03-24 12:14:52,925 INFO org.dspace.app.webui.servlet.RetrieveServlet @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=b90f958c-4fe4-40e8-8c0a-362d989c1e6f

2017-03-24 12:14:52,925 INFO org.dspace.usage.LoggerUsageEventListener @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:view_bitstream:bitstream_id=b90f958c-4fe4-40e8-8c0a-362d989c1e6f

2017-03-24 12:14:56,199 INFO org.dspace.content.CommunityServiceImpl @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:add_collection:community_id=45b4eb45-3998-4d7a-b5d2-e5a5717c16b9,collection_id=f3fda954-233e-44f3-8379-2f8e3dd35ee0

2017-03-24 12:14:56,202 INFO org.hibernate.dialect.Dialect @ HHH000400: Using dialect: org.hibernate.dialect.PostgreSQL82Dialect

2017-03-24 12:14:56,212 INFO org.dspace.content.CollectionServiceImpl @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:create_collection:collection_id=f3fda954-233e-44f3-8379-2f8e3dd35ee0,handle=123456789/22

2017-03-24 12:14:56,249 INFO org.dspace.discovery.SolrServiceImpl @ Wrote Collection: 123456789/22 to Index

2017-03-24 12:15:02,828 INFO org.dspace.eperson.GroupServiceImpl @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:create_group:group_id=22008f18-eab9-4b83-b885-e356c8801418

2017-03-24 12:15:02,840 INFO org.dspace.eperson.GroupServiceImpl @ m.gen...@ub.uni-mainz.de:session_id=9F063D877097EE508D68D1DC3A280E45:ip_addr=134.93.236.34:update_group:group_id=22008f18-eab9-4b83-b885-e356c8801418

2017-03-24 12:15:02,853 WARN org.dspace.app.webui.servlet.InternalErrorServlet @ :session_id=9F063D877097EE508D68D1DC3A280E45:internal_error:-- URL Was: http://ub-service-03.zdv.uni-mainz.de/jspui/tools/collection-wizard

-- Method: POST

-- Parameters were:

-- public_read: "true"

-- submitters: "true"

-- workflow2: "true"

-- default.item: "true"

-- collection_id: "f3fda954-233e-44f3-8379-2f8e3dd35ee0"

-- stage: "1"

-- submit_next: "Next >"

javax.servlet.ServletException: Servlet execution threw an exception

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:237)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:165)

at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:192)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:165)

at org.dspace.app.webui.filter.RegisteredOnlyFilter.doFilter(RegisteredOnlyFilter.java:66)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:192)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:165)

at org.dspace.utils.servlet.DSpaceWebappServletFilter.doFilter(DSpaceWebappServletFilter.java:78)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:192)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:165)

at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:198)

at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)

at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:474)

at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:140)

at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:79)

at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:624)

at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:87)

at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:349)

at org.apache.coyote.ajp.AjpProcessor.service(AjpProcessor.java:478)

at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:66)

at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:789)

at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1437)

at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)

at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)

at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)

at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)

at java.lang.Thread.run(Thread.java:745)

Caused by: java.lang.StackOverflowError

at org.dspace.eperson.GroupServiceImpl.getChildren(GroupServiceImpl.java:639)

at org.dspace.eperson.GroupServiceImpl.getChildren(GroupServiceImpl.java:642)

...

[1024 times same output line]

...

at org.dspace.eperson.GroupServiceImpl.getChildren(GroupServiceImpl.java:642)

2017-03-24 12:15:02,864 WARN org.dspace.app.webui.util.UIUtil @ Unable to send email alert

org.hibernate.LazyInitializationException: failed to lazily initialize a collection of role: org.dspace.content.DSpaceObject.metadata, could not initialize proxy - no Session

at org.hibernate.collection.internal.AbstractPersistentCollection.throwLazyInitializationException(AbstractPersistentCollection.java:569)

at org.hibernate.collection.internal.AbstractPersistentCollection.withTemporarySessionIfNeeded(AbstractPersistentCollection.java:188)

at org.hibernate.collection.internal.AbstractPersistentCollection.initialize(AbstractPersistentCollection.java:548)

at org.hibernate.collection.internal.AbstractPersistentCollection.read(AbstractPersistentCollection.java:126)

at org.hibernate.collection.internal.PersistentBag.iterator(PersistentBag.java:266)

at org.dspace.content.DSpaceObjectServiceImpl.getMetadata(DSpaceObjectServiceImpl.java:129)

at org.dspace.content.DSpaceObjectServiceImpl.getMetadataFirstValue(DSpaceObjectServiceImpl.java:380)

at org.dspace.eperson.EPerson.getFirstName(EPerson.java:250)

at org.dspace.eperson.EPerson.getFullName(EPerson.java:226)

at org.dspace.app.webui.util.UIUtil.sendAlert(UIUtil.java:531)

at org.dspace.app.webui.servlet.InternalErrorServlet.doGet(InternalErrorServlet.java:54)

at org.dspace.app.webui.servlet.InternalErrorServlet.doPost(InternalErrorServlet.java:62)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:648)

at javax.servlet.http.HttpServlet.service(HttpServlet.java:729)

at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:230)

at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:165)

at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:726)

at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:471)

at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:394)

at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:311)

at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:395)

at org.apache.catalina.core.StandardHostValve.throwable(StandardHostValve.java:332)

at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:175)