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taravat rasooli
,
Frank Yeh
2
7:58 AM
Seeking Guidance on Overlapping Tracts in DSI Studio Analysis
Tha assigned name is only a suggestion. You may refer to neuroanatomy to give a more precise naming.
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Seeking Guidance on Overlapping Tracts in DSI Studio Analysis
Tha assigned name is only a suggestion. You may refer to neuroanatomy to give a more precise naming.
7:58 AM
Jolene Foster
, …
Frank Yeh
8
Nov 29
DSI Crashing
Sorry about the bug. Could you let me know the exact steps to reproduce the crash? Once I can
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DSI Crashing
Sorry about the bug. Could you let me know the exact steps to reproduce the crash? Once I can
Nov 29
Maria Ana
,
Frank Yeh
12
Nov 28
Different results using mrtrix pre-processed data vs DSI studio pre-processed data
Yeh FC et. al. IEEE TMI 2010 Sorry for taking so long to get back to you. Thank you so much for all
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Different results using mrtrix pre-processed data vs DSI studio pre-processed data
Yeh FC et. al. IEEE TMI 2010 Sorry for taking so long to get back to you. Thank you so much for all
Nov 28
Ashley Pike
,
Frank Yeh
2
Nov 27
Hou Version Tractography Batch Processing
> 1. When running --action=trk with flag --recognize=cluster_info, it creates the stat.txt,
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Hou Version Tractography Batch Processing
> 1. When running --action=trk with flag --recognize=cluster_info, it creates the stat.txt,
Nov 27
Aaron Suminski
,
Frank Yeh
2
Nov 27
Correlational Tractography
It is a two-step process. The first step removes the effect of covariates (eg age, sex) on the
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Correlational Tractography
It is a two-step process. The first step removes the effect of covariates (eg age, sex) on the
Nov 27
Smith
,
Frank Yeh
6
Nov 25
tracking of visual tracts
Dear Dr Frank, I will be doing DTI with more than 1500 b value and 2mm isotropic resolution. By the
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tracking of visual tracts
Dear Dr Frank, I will be doing DTI with more than 1500 b value and 2mm isotropic resolution. By the
Nov 25
Andrea Atanasov
,
Frank Yeh
2
Nov 22
QSDR reconstruction-mouse
Did you apply the preprocessing steps as described in https://dsi-studio.labsolver.org/doc/gui_t2.
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QSDR reconstruction-mouse
Did you apply the preprocessing steps as described in https://dsi-studio.labsolver.org/doc/gui_t2.
Nov 22
Eric Kirby
,
Frank Yeh
2
Nov 21
Stroke Tractography Analysis
> > 1. How should I be dealing with registrations of these different scans? Normally with
unread,
Stroke Tractography Analysis
> > 1. How should I be dealing with registrations of these different scans? Normally with
Nov 21
Erica Baller
, …
Frank Yeh
4
Nov 21
DSI studio for M2?
The "Hou" version exclusively uses Qt6 because many operating systems no longer support Qt5
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DSI studio for M2?
The "Hou" version exclusively uses Qt6 because many operating systems no longer support Qt5
Nov 21
Elizabeth Castro
,
Frank Yeh
6
Nov 20
Saving a .tt.gz file in MATLAB
Once you convert tracts to ROI, a lot of information are gone. The last step won't work out. On
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Saving a .tt.gz file in MATLAB
Once you convert tracts to ROI, a lot of information are gone. The last step won't work out. On
Nov 20
鄢翠
,
Frank Yeh
4
Nov 20
DSI data
FSL is good and credible. Thank you for your help! If I do the pre-processing steps with FSL software
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DSI data
FSL is good and credible. Thank you for your help! If I do the pre-processing steps with FSL software
Nov 20
L. Tanushree
,
Frank Yeh
4
Nov 19
Exporting mean diffusivity
Yes, the related parameters are documented on the DSIStudio website. Best Frank L. Tanushree <
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Exporting mean diffusivity
Yes, the related parameters are documented on the DSIStudio website. Best Frank L. Tanushree <
Nov 19
B J
,
Frank Yeh
2
Nov 19
Separate P-A b0 file added to post topup/eddy nifti file
It should be fine. You may manually check if Eddy topup is working correctly in DSI Studio. (The
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Separate P-A b0 file added to post topup/eddy nifti file
It should be fine. You may manually check if Eddy topup is working correctly in DSI Studio. (The
Nov 19
Smith
,
Frank Yeh
2
Nov 19
Optic tract -single shell b =1000 and 64 directions
The 3mm large slice spacing is not good for mapping optic pathways. The ideal setting is to have 2mm
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Optic tract -single shell b =1000 and 64 directions
The 3mm large slice spacing is not good for mapping optic pathways. The ideal setting is to have 2mm
Nov 19
Triana Karnadipa
,
Frank Yeh
10
Nov 18
Commands are not recognised in LQT Matlab-based
The error is related to the matlab code in LQT, which is not maintained by DSI Studio. You may
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Commands are not recognised in LQT Matlab-based
The error is related to the matlab code in LQT, which is not maintained by DSI Studio. You may
Nov 18
Ashley Pike
Nov 18
CLI Reconstruction --mask flag errors
Good afternoon, I am using the Hou version of DSI Studio and I am getting the same error message for
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CLI Reconstruction --mask flag errors
Good afternoon, I am using the Hou version of DSI Studio and I am getting the same error message for
Nov 18
Daria Sharapova
,
Frank Yeh
3
Nov 18
correl tractography blue and red tracks difference
if it will be helpful I can download our data and more details via data upload on the dsi studio
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correl tractography blue and red tracks difference
if it will be helpful I can download our data and more details via data upload on the dsi studio
Nov 18
Hai-Ti Lin
,
Frank Yeh
2
Nov 17
Correlational Tractography for three groups?
It is possible but not yet available in DSI Studio. Hai-Ti Lin <htdai...@gmail.com> 於 2024年11
unread,
Correlational Tractography for three groups?
It is possible but not yet available in DSI Studio. Hai-Ti Lin <htdai...@gmail.com> 於 2024年11
Nov 17
B J
,
Frank Yeh
3
Nov 15
Laptop specs recommendation
Thank you so much! On Friday, November 15, 2024 at 4:14:09 PM UTC-5 Frank Yeh wrote: Here's an
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Laptop specs recommendation
Thank you so much! On Friday, November 15, 2024 at 4:14:09 PM UTC-5 Frank Yeh wrote: Here's an
Nov 15
ps l
,
Frank Yeh
2
Nov 15
Inquiry on Assigning Unique Colors and Generating Color Labels for Multiple Tracts
Thanks for the suggestion. I updated DSI Studio ro provide a different cluster color. See if the
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Inquiry on Assigning Unique Colors and Generating Color Labels for Multiple Tracts
Thanks for the suggestion. I updated DSI Studio ro provide a different cluster color. See if the
Nov 15
José Michelle Doeren
, …
Frank Yeh
7
Nov 15
problems with alignment and WHS atlas
I updated DSI Studio again to fix another bug that does not generate tractography. If you just
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problems with alignment and WHS atlas
I updated DSI Studio again to fix another bug that does not generate tractography. If you just
Nov 15
yixin gu
,
Frank Yeh
2
Nov 15
shape analysis
Sorry for the late reply. You can assign the tt.gz or trk.gz to --source to replace the location of
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shape analysis
Sorry for the late reply. You can assign the tt.gz or trk.gz to --source to replace the location of
Nov 15
L. Tanushree
,
Frank Yeh
3
Nov 15
eddy correction errors
I tried it worked. Thanks alot. L. Tanushree Junior Research Fellow Department of NI&IR National
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eddy correction errors
I tried it worked. Thanks alot. L. Tanushree Junior Research Fellow Department of NI&IR National
Nov 15
L. Tanushree
,
Frank Yeh
2
Nov 14
Multishell processing
check out --other_source at https://dsi-studio.labsolver.org/doc/cli_t1.html
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Multishell processing
check out --other_source at https://dsi-studio.labsolver.org/doc/cli_t1.html
Nov 14
鵜飼亮
,
Frank Yeh
4
Nov 12
Question about dat-atlas"ICBM_adult.tt.gz"
Yes 鵜飼亮 <ry...@sapmed.ac.jp> 於 2024年11月12日 週二 上午6:31 寫道: Dear Frank Thank you for your quick
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Question about dat-atlas"ICBM_adult.tt.gz"
Yes 鵜飼亮 <ry...@sapmed.ac.jp> 於 2024年11月12日 週二 上午6:31 寫道: Dear Frank Thank you for your quick
Nov 12
Hannah Lindsey
, …
Frank Yeh
8
Nov 11
grid-258 on skyra
Wonderful. I just sent it to your fran...@gmail.com address. Thanks again!! On Monday, November 11,
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grid-258 on skyra
Wonderful. I just sent it to your fran...@gmail.com address. Thanks again!! On Monday, November 11,
Nov 11
Abby Tang
,
Frank Yeh
3
Nov 11
Inquire about the use of ROI regions
Yes, it includes both. On Mon, Nov 11, 2024 at 12:47 AM Abby Tang <abbyta...@gmail.com>
unread,
Inquire about the use of ROI regions
Yes, it includes both. On Mon, Nov 11, 2024 at 12:47 AM Abby Tang <abbyta...@gmail.com>
Nov 11
Yuxin Yan
,
Frank Yeh
2
Nov 6
DSI_studio loading file error
You may check out tutorial videos at https://practicum.labsolver.org/ Frank On Wed, Nov 6, 2024 at 1:
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DSI_studio loading file error
You may check out tutorial videos at https://practicum.labsolver.org/ Frank On Wed, Nov 6, 2024 at 1:
Nov 6
Pablo Vizcaíno García
,
Frank Yeh
2
Nov 6
Quaility Check Through CMI
dsi_studio --action=qc --source=/folder_storing_src_siles On Wed, Nov 6, 2024 at 4:53 AM Pablo
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Quaility Check Through CMI
dsi_studio --action=qc --source=/folder_storing_src_siles On Wed, Nov 6, 2024 at 4:53 AM Pablo
Nov 6
Jeanette Kenley
,
Frank Yeh
2
Nov 6
T2R
This is a new function and produces a different matrix/vector. You may check out details at https://
unread,
T2R
This is a new function and produces a different matrix/vector. You may check out details at https://
Nov 6