DSI Studio

Dear Dr. Yeh, I downloaded the version from the link below: https://github.com/frankyeh/DSI-Studio/

There are two related ways to do this. First, if you only want to identify fibers that pass through

Thanks Frank. I used the brain.mgz from freesurfer (converted to .nii) and this worked. Best, Josh On

Hi Divya, I committed a fix and updated DSI Studio. Could you download the most recent version (dated

Hi Frank, Thank you for explaining this. We will try the analysis on the neonate template. Best, Josh

Hi Steven, The current tractography atlas uses a different tract hierarchy from the older atlas.

Dear Taravat, There is no separate peer-reviewed paper specifically for ROI-constrained correlational

Dear Professor, Thank you for the clear explanation. I appreciate your help and support I'll

Hello Karen, The GUI AutoTrack and CLI --action=atk are not always directly comparable. In the GUI,

DSI Studio only uses the GPU for image registration, normalization, and segmentation. On Fri, May 15,

Yes, I would do that using command history. On Thu, May 14, 2026 at 12:03 PM 'Mark Pinsk' via

The GUI also support batch processing using command history: eg wk1 videos at practicum.labsolver.org

On Thu, May 14, 2026 at 12:02 PM 柯酥卤 <kesul...@gmail.com> wrote: 我所有操作都和提问者一致的话应该采用什么指令能够生成这个

The atlas will be updated in the next coming release (in few days). At the time being, you may

I would recommend using Neighboring DWI Correlations (NDC) to identify potential outliers.

Glad to know that it works on your side. If you have any suggestions, please feel free to let me know

For the patients with lesions, do you think leaving lesions unmasked could introduce issues at later

Sorry for the delayed reply. > In the "Study Variables" section, I cannot find an option

I computed the difference maps I assume you get a new database storing the longitudinal changes here.

Perfec. Thank you so much, Frank! On Mon, Mar 23, 2026 at 4:20 PM Frank Yeh <fran...@gmail.com

Dear Dr. Yeh, Thank you very much for developing DSI Studio and making it such a useful tool. It has

There are many tools available, such FSL, SPM, ANT...etc. On Mon, Apr 13, 2026 at 12:04 PM Braeden

To display and export your results as a 2D mosaic, please navigate to the "Step T3c" tab.

yes On Thu, Apr 2, 2026 at 11:48 AM Steven J Granger <gran...@uci.edu> wrote: > > Hi

Hi Drew, The libQt6Core.so.6 error you are seeing is a common issue when running newer Qt6-based

Dear Xu Zhang, Batch Processing and Atlas Loading The AAL116 atlas is a gray matter parcellation

First convert atk bundles as region NIFTI files. You may use --action=atk --source=sub.fz --action=

Thank you for the help here, Frank. I was able to successfully accomplish this at the regional level

Sorry for the long delay in responding to this issue. Most DWI data has large distortion and signal

Sorry for the late reply. > > I am currently investigating brain connectivity across different