DSI Studio

1–30 of 1078

DSI Studio is a diffusion MRI analysis tool with a collective implementation of several methods, including DTI, GQI, QSDR, diffusion MRI connectometry, and generalized deterministic fiber tracking. The software can be download from http://dsi-studio.labsolver.org

0 selected

liu jiaxuan, Frank Yeh3

4:53 AM

Question about GRID258_b_table

Thank you Frank！ On Friday, April 30, 2021 at 8:55:52 AM UTC+8 Frank Yeh wrote: Using the bipolar

unread,

Question about GRID258_b_table

Thank you Frank！ On Friday, April 30, 2021 at 8:55:52 AM UTC+8 Frank Yeh wrote: Using the bipolar

4:53 AM

이익성, Frank Yeh7

May 5

Can I remove regions blow threshold?

Updated to the Windows version. See if it works for you. If you are using the Mac version, please let

unread,

Can I remove regions blow threshold?

Updated to the Windows version. See if it works for you. If you are using the Mac version, please let

May 5

Margherita Matarrese, Frank Yeh2

May 5

Communication problems between DSI and Brainstorm

Dealing with the transformation matrix directly will be very challenging because different tools have

unread,

Communication problems between DSI and Brainstorm

Dealing with the transformation matrix directly will be very challenging because different tools have

May 5

Luisa Figueredo, Frank Yeh2

May 4

Error with demographics

If possible, you can upload the db,fib,gz file and csv file, and I can help fix the problem. Best,

unread,

Error with demographics

If possible, you can upload the db,fib,gz file and csv file, and I can help fix the problem. Best,

May 4

Margherita Matarrese, Frank Yeh2

May 3

MRI slices visualization

I tried on DSI Studio but did not work out. I will keep this feature on the list and see if there is

unread,

MRI slices visualization

I tried on DSI Studio but did not work out. I will keep this feature on the list and see if there is

May 3

Luca Fornia, Frank Yeh2

May 3

DSI_studio pre-processing Eddy.

You can output NIFTI files and b-tables. DSI Studio should be able to use them for further processing

unread,

DSI_studio pre-processing Eddy.

You can output NIFTI files and b-tables. DSI Studio should be able to use them for further processing

May 3

shark_p...@hotmail.com, Frank Yeh3

Apr 30

Question about Region Window

Thank you Frank El viernes, 30 de abril de 2021 a la(s) 08:02:47 UTC-5, Frank Yeh escribió: You can

unread,

Question about Region Window

Thank you Frank El viernes, 30 de abril de 2021 a la(s) 08:02:47 UTC-5, Frank Yeh escribió: You can

Apr 30

shark_p...@hotmail.com

Apr 30

Question about Region Window

Hi! Frank, I am here again, When I open the fib file, I can't see nothing in the area Region

unread,

Question about Region Window

Hi! Frank, I am here again, When I open the fib file, I can't see nothing in the area Region

Apr 30

shark_p...@hotmail.com, Frank Yeh5

Apr 28

question about run reconstruction

You will need 2dseq to process Bruker data. I am not able to help unless you get the right data. Best

unread,

question about run reconstruction

You will need 2dseq to process Bruker data. I am not able to help unless you get the right data. Best

Apr 28

maede...@gmail.com, Frank Yeh3

Apr 28

A Question Regarding Connectivity Threshold

Sorry I missed the email and thanks for the reminder. > On Monday, April 26, 2021 at 2:30:49 PM

unread,

A Question Regarding Connectivity Threshold

Sorry I missed the email and thanks for the reminder. > On Monday, April 26, 2021 at 2:30:49 PM

Apr 28

Apr 26

Connectivity matrix - threshold

The dti_fa weighted one may give a high value even if there is just one track connecting. DSI Studio

unread,

Connectivity matrix - threshold

The dti_fa weighted one may give a high value even if there is just one track connecting. DSI Studio

Apr 26

mfoula...@gmail.com, Frank Yeh5

Apr 26

A Question about the Value of the Threshold in Fiber Tracking using the GUI

thanks, On Mon, Apr 26, 2021 at 5:45 PM Frank Yeh <frank.yeh@gmail.com> wrote: Yes, it is.

unread,

A Question about the Value of the Threshold in Fiber Tracking using the GUI

thanks, On Mon, Apr 26, 2021 at 5:45 PM Frank Yeh <frank.yeh@gmail.com> wrote: Yes, it is.

Apr 26

Apr 26

Help - Create SRC file

Thank you!! On Sunday, April 25, 2021 at 2:52:29 PM UTC+2 Frank Yeh wrote: Yes, you should use eddy

unread,

Help - Create SRC file

Thank you!! On Sunday, April 25, 2021 at 2:52:29 PM UTC+2 Frank Yeh wrote: Yes, you should use eddy

Apr 26

Melissa Stoeckmann, Frank Yeh5

Apr 23

Connectometry Interaction Effects

> Yes, that is possible because FDR is calculated from overall results. This is like ANOVA

unread,

Connectometry Interaction Effects

> Yes, that is possible because FDR is calculated from overall results. This is like ANOVA

Apr 23

najme soleimani, Frank Yeh7

Apr 23

Question regarding the reconstruction step

Thanks more... On Friday, April 23, 2021 at 11:27:18 PM UTC+4:30 Frank Yeh wrote: It seems to me that

unread,

Question regarding the reconstruction step

Thanks more... On Friday, April 23, 2021 at 11:27:18 PM UTC+4:30 Frank Yeh wrote: It seems to me that

Apr 23

Luca Fornia, Frank Yeh3

Apr 23

motion correction

Thank you very much. Inviato dal mio telefono Huawei -------- Messaggio originale -------- Da: Frank

unread,

motion correction

Thank you very much. Inviato dal mio telefono Huawei -------- Messaggio originale -------- Da: Frank

Apr 23

Aleksi Sihvonen, Frank Yeh2

Apr 23

Connectometry analysis: Study Region, possible bug?

The FDR is calculated by the ratio of findings between permuted and non-permuted demographics. Adding

unread,

Connectometry analysis: Study Region, possible bug?

The FDR is calculated by the ratio of findings between permuted and non-permuted demographics. Adding

Apr 23

Aleksi Sihvonen, Frank Yeh5

Apr 23

Differential tractography - with covariates?

Ok, thank you very much Frank! Best, Aleksi On Thursday, 22 April 2021 at 15:07:18 UTC+3 Frank Yeh

unread,

Differential tractography - with covariates?

Ok, thank you very much Frank! Best, Aleksi On Thursday, 22 April 2021 at 15:07:18 UTC+3 Frank Yeh

Apr 23

Jean Kim, Frank Yeh10

Apr 22

Group connectometry : extract mean dti_fa value of significant results

The cord tracks are in the template space, not subjects native space. You will need to follow the

unread,

Group connectometry : extract mean dti_fa value of significant results

The cord tracks are in the template space, not subjects native space. You will need to follow the

Apr 22

Matthew Cieslak

Apr 21

Postdoctoral position in diffusion imaging

Hi DSI Studio community! Our group is looking to hire a postdoctoral fellow to work with us on

unread,

Postdoctoral position in diffusion imaging

Hi DSI Studio community! Our group is looking to hire a postdoctoral fellow to work with us on

Apr 21

Hossein Rahimzadeh, Frank Yeh2

Apr 20

dsi studio not responding

Hi Hossein, Sorry I have no clue. I am also using the Windows system, and it does not have the

unread,

dsi studio not responding

Hi Hossein, Sorry I have no clue. I am also using the Windows system, and it does not have the

Apr 20

akiraw...@gmail.com, … Frank Yeh12

Apr 17

What do the statistical outputs from fiber tracking mean

There are another question about your suggest: "export the track end-point". A .txt file

unread,

What do the statistical outputs from fiber tracking mean

There are another question about your suggest: "export the track end-point". A .txt file

Apr 17

Crest-E MGH, Frank Yeh3

Apr 16

Command Line Tractography Native Space

Hi Frank, I updated to the April 16 2021 build and the command now works. Thank you so much for your

unread,

Command Line Tractography Native Space

Hi Frank, I updated to the April 16 2021 build and the command now works. Thank you so much for your

Apr 16

Johnnie Kay, Frank Yeh2

Apr 16

Tiny bug in tract rendering

Thank you for reporting this problem. I tested the bug. This seems to be boxed in the most updated

unread,

Tiny bug in tract rendering

Thank you for reporting this problem. I tested the bug. This seems to be boxed in the most updated

Apr 16

mudat...@gmail.com, Frank Yeh2

Apr 15

I am sorry that I also have no idea. You may try adjusting other settings as well to see if it works.

unread,

I am sorry that I also have no idea. You may try adjusting other settings as well to see if it works.

Apr 15

maede...@gmail.com, Frank Yeh7

Apr 14

A Question Regarding Tracking Threshold

Thank you very much. I got how to solve the problem of bad slices, I drop boxed you 2 files (one of

unread,

A Question Regarding Tracking Threshold

Thank you very much. I got how to solve the problem of bad slices, I drop boxed you 2 files (one of

Apr 14

Pedro Henrique, Frank Yeh5

Apr 13

Thank you Very much! Em ter, 13 de abr de 2021 17:47, Frank Yeh <frank.yeh@gmail.com> escreveu:

unread,

Thank you Very much! Em ter, 13 de abr de 2021 17:47, Frank Yeh <frank.yeh@gmail.com> escreveu:

Apr 13

johnk2...@gmail.com, Frank Yeh14

Apr 12

DTI for non-accidental head trauma in children

Honestly speaking, I have no idea, but this is an interesting finding (I did not notice this before

unread,

DTI for non-accidental head trauma in children

Honestly speaking, I have no idea, but this is an interesting finding (I did not notice this before

Apr 12

najme soleimani, Frank Yeh10

Apr 12

tracking thereshold

Thanks. The data are HCP data, and if you concern about the CSF, you can include CSF regions from

unread,

tracking thereshold

Thanks. The data are HCP data, and if you concern about the CSF, you can include CSF regions from

Apr 12

Elisha Phull, Frank Yeh3

Apr 9

Seeding Pattern

If there are multiple END ROIs, is it treated as an AND or OR situation? I mean that if two end ROIs

unread,

Seeding Pattern

If there are multiple END ROIs, is it treated as an AND or OR situation? I mean that if two end ROIs

Apr 9

Search

Clear search

Close search

Google apps

Main menu