About the automatic bad slice removal

[Xiaoxiao Bai]

Dear Dr. Yeh,

I have preprocessed the DTI data in the QSIPrep. Could I use the FD value in the DSI Studio to replace the bad slice removal? In addition, Is it possible to apply the bad slices in the command line mode?

Thank you for your help.

Xiaoxiao Bai

[Fang-Cheng Yeh]

Sorry, this is not available in DSI Studio because FSL eddy and other
tools have functions to replace bad slices.
It is unlikely we are going to make a new one here.
Frank

> --
> You received this message because you are subscribed to the Google Groups "DSI Studio" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to dsi-studio+...@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/dsi-studio/6a587f8f-3798-40f8-8b18-b9f8372da827n%40googlegroups.com.

[Bai, Xiaoxiao]

Thank Frank.

Xiaoxiao

---

From: Fang-Cheng Yeh <fran...@gmail.com>
Sent: Monday, May 22, 2023 3:06 PM
To: baixx013 <baix...@gmail.com>
Cc: DSI Studio <dsi-s...@googlegroups.com>
Subject: Re: [dsi-studio] About the automatic bad slice removal

 

[You don't often get email from fran...@gmail.com. Learn why this is important at https://aka.ms/LearnAboutSenderIdentification ]

Sorry, this is not available in DSI Studio because FSL eddy and other
tools have functions to replace bad slices.
It is unlikely we are going to make a new one here.
Frank

On Mon, May 22, 2023 at 2:57 PM Xiaoxiao Bai <baix...@gmail.com> wrote:
>
> Dear Dr. Yeh,
>
> I have preprocessed the DTI data in the QSIPrep. Could I use the FD value in the DSI Studio to replace the bad slice removal? In addition, Is it possible to apply the bad slices in the command line mode?
>
> Thank you for your help.
>
> Xiaoxiao Bai
>
> --
> You received this message because you are subscribed to the Google Groups "DSI Studio" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to dsi-studio+...@googlegroups.com.

> To view this discussion on the web visit https://nam10.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgroups.google.com%2Fd%2Fmsgid%2Fdsi-studio%2F6a587f8f-3798-40f8-8b18-b9f8372da827n%2540googlegroups.com&data=05%7C01%7Cxxb4%40psu.edu%7C7afcb20d7378421e2ba508db5af7c1ca%7C7cf48d453ddb4389a9c1c115526eb52e%7C0%7C0%7C638203792383097039%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000%7C%7C%7C&sdata=R87DmTTZK9d2zge%2BTTxlNPIR3FHgdWq75GMjOd9zmx8%3D&reserved=0.