SIGMA rat brain template

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Dita

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Sep 15, 2022, 9:26:56 PMSep 15
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Dear Dr. Frank Yeh,

I tried to add SIGMA rat brain templates as a new atlas. But it shows that FA map is needed. Is it possible to add SIGMA rat brain templates without FA map? 

Thanks a lot!


Fang-Cheng Yeh

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Sep 15, 2022, 9:46:40 PMSep 15
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I could warp all SIGMA volume to DSI Studio's rat space.
Which volume would you like to use? the parcellation or a particular modality?
Frank

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Dita

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Sep 16, 2022, 2:30:09 AMSep 16
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I warp both SIGMA masked brain and atlas file, and gzip in Matlab. And make a folder in the 'atlas' folder in DSI studio. But it doesn't work.

Fang-Cheng Yeh

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Sep 16, 2022, 8:53:11 AMSep 16
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You will need to warp  SIGMA  data to the images in atlas/WHS_SD_rat and place them there.
Frank

Dita

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Sep 17, 2022, 10:38:58 PMSep 17
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ok

Dita

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Sep 18, 2022, 12:26:55 AMSep 18
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But the warp SIGMA brain tempaltes will to converted to WHS_SD_rat brain templates:::(
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