DSI Studio crashes on rat atlas
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Kamil Lipiński
Aug 4, 2021, 5:46:57 AM8/4/21
to DSI Studio
Dear Dr. Yeh,
I am trying to get ROIs from atlas, but the software is crashing few seconds after I click Atlas with option WHS_SD_RAT selected. Do you have any suggestions why it goes wrong? I would be very grateful for any help.
Best Regards,
Kamil Lipinski
Attached crash details:
Process: dsi_studio [1858]
Path: /Applications/dsi_studio.app/Contents/MacOS/dsi_studio
Identifier: frank.dsi-studio
Version: 0
Code Type: X86-64 (Native)
Parent Process: ??? [1]
Responsible: dsi_studio [1858]
User ID: 501
Date/Time: 2021-08-04 11:40:47.369 +0200
OS Version: macOS 11.5.1 (20G80)
Report Version: 12
Bridge OS Version: 5.5 (18P4759a)
Anonymous UUID: 885B0761-05AE-4734-CD8A-90E2373016BF
Time Awake Since Boot: 3600 seconds
System Integrity Protection: enabled
Crashed Thread: 8
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Exception Note: EXC_CORPSE_NOTIFY
Application Specific Information:
abort() called
terminating with uncaught exception of type char const*
Thread 0:: Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff204bebb2 __semwait_signal + 10
1 libsystem_c.dylib 0x00007fff2043ec1a nanosleep + 196
2 libc++.1.dylib 0x00007fff2049193a std::__1::this_thread::sleep_for(std::__1::chrono::duration<long long, std::__1::ratio<1l, 1000000000l> > const&) + 73
3 frank.dsi-studio 0x000000010fa479aa fib_data::run_normalization(bool, bool) + 1978
4 frank.dsi-studio 0x000000010fa4c232 fib_data::can_map_to_mni() + 34
5 frank.dsi-studio 0x000000010f876f44 tracking_window::on_addRegionFromAtlas_clicked() + 52
6 frank.dsi-studio 0x000000010fb3d08e tracking_window::qt_metacall(QMetaObject::Call, int, void**) + 62
7 org.qt-project.QtCore 0x0000000110ba4bfd QMetaObject::activate(QObject*, int, int, void**) + 1773
8 org.qt-project.QtWidgets 0x000000010ff9abef 0x10fea0000 + 1027055
9 org.qt-project.QtWidgets 0x000000010ff9aa8c 0x10fea0000 + 1026700
10 org.qt-project.QtWidgets 0x000000010ff9bbbf QAbstractButton::mouseReleaseEvent(QMouseEvent*) + 271
11 org.qt-project.QtWidgets 0x000000010feec5fd QWidget::event(QEvent*) + 445
12 org.qt-project.QtWidgets 0x000000010feb08ed QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
13 org.qt-project.QtWidgets 0x000000010feb3748 QApplication::notify(QObject*, QEvent*) + 7336
14 org.qt-project.QtCore 0x0000000110b73ef4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
15 org.qt-project.QtWidgets 0x000000010feb1210 QApplicationPrivate::sendMouseEvent(QWidget*, QMouseEvent*, QWidget*, QWidget*, QWidget**, QPointer<QWidget>&, bool, bool) + 896
16 org.qt-project.QtWidgets 0x000000010ff0baae 0x10fea0000 + 441006
17 org.qt-project.QtWidgets 0x000000010ff0a795 0x10fea0000 + 436117
18 org.qt-project.QtWidgets 0x000000010feb08ed QApplicationPrivate::notify_helper(QObject*, QEvent*) + 269
19 org.qt-project.QtWidgets 0x000000010feb1cf2 QApplication::notify(QObject*, QEvent*) + 594
20 org.qt-project.QtCore 0x0000000110b73ef4 QCoreApplication::notifyInternal2(QObject*, QEvent*) + 212
21 org.qt-project.QtGui 0x000000011047627c QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 3404
22 org.qt-project.QtGui 0x0000000110476602 QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 4306
23 org.qt-project.QtGui 0x000000011045d5ab QWindowSystemInterface::sendWindowSystemEvents(QFlags<QEventLoop::ProcessEventsFlag>) + 219
24 libqcocoa.dylib 0x0000000112f879d0 0x112f57000 + 199120
25 libqcocoa.dylib 0x0000000112f88130 0x112f57000 + 201008
26 com.apple.CoreFoundation 0x00007fff205ea94c __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17
27 com.apple.CoreFoundation 0x00007fff205ea8b4 __CFRunLoopDoSource0 + 180
28 com.apple.CoreFoundation 0x00007fff205ea634 __CFRunLoopDoSources0 + 242
29 com.apple.CoreFoundation 0x00007fff205e905c __CFRunLoopRun + 893
30 com.apple.CoreFoundation 0x00007fff205e861c CFRunLoopRunSpecific + 563
31 com.apple.HIToolbox 0x00007fff2882da83 RunCurrentEventLoopInMode + 292
32 com.apple.HIToolbox 0x00007fff2882d6b6 ReceiveNextEventCommon + 284
33 com.apple.HIToolbox 0x00007fff2882d583 _BlockUntilNextEventMatchingListInModeWithFilter + 70
34 com.apple.AppKit 0x00007fff22def502 _DPSNextEvent + 864
35 com.apple.AppKit 0x00007fff22dedcd5 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1364
36 com.apple.AppKit 0x00007fff22de0049 -[NSApplication run] + 586
37 libqcocoa.dylib 0x0000000112f870ab 0x112f57000 + 196779
38 org.qt-project.QtCore 0x0000000110b6f55f QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) + 431
39 org.qt-project.QtCore 0x0000000110b74502 QCoreApplication::exec() + 130
40 frank.dsi-studio 0x000000010f768d7f main + 1407
41 libdyld.dylib 0x00007fff2050cf3d start + 1
Thread 1:: com.apple.NSEventThread
0 libsystem_kernel.dylib 0x00007fff204bc2ba mach_msg_trap + 10
1 libsystem_kernel.dylib 0x00007fff204bc62c mach_msg + 60
2 com.apple.CoreFoundation 0x00007fff205eab2f __CFRunLoopServiceMachPort + 316
3 com.apple.CoreFoundation 0x00007fff205e920f __CFRunLoopRun + 1328
4 com.apple.CoreFoundation 0x00007fff205e861c CFRunLoopRunSpecific + 563
5 com.apple.AppKit 0x00007fff22f755ca _NSEventThread + 124
6 libsystem_pthread.dylib 0x00007fff204f18fc _pthread_start + 224
7 libsystem_pthread.dylib 0x00007fff204ed443 thread_start + 15
Thread 2:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 3:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 4:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 5:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 6:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 7:
0 libsystem_pthread.dylib 0x00007fff204ed420 start_wqthread + 0
Thread 8 Crashed:
0 libsystem_kernel.dylib 0x00007fff204c292e __pthread_kill + 10
1 libsystem_pthread.dylib 0x00007fff204f15bd pthread_kill + 263
2 libsystem_c.dylib 0x00007fff20446406 abort + 125
3 libc++abi.dylib 0x00007fff204b4ef2 abort_message + 241
4 libc++abi.dylib 0x00007fff204a65fd demangling_terminate_handler() + 266
5 libobjc.A.dylib 0x00007fff2039f595 _objc_terminate() + 104
6 libc++abi.dylib 0x00007fff204b4307 std::__terminate(void (*)()) + 8
7 libc++abi.dylib 0x00007fff204b6beb __cxxabiv1::failed_throw(__cxxabiv1::__cxa_exception*) + 27
8 libc++abi.dylib 0x00007fff204b6bb2 __cxa_throw + 116
9 frank.dsi-studio 0x000000010f81eb7d 0x10f759000 + 809853
10 frank.dsi-studio 0x000000010fa4aa91 0x10f759000 + 3086993
11 frank.dsi-studio 0x000000010fa51a2d 0x10f759000 + 3115565
12 libsystem_pthread.dylib 0x00007fff204f18fc _pthread_start + 224
13 libsystem_pthread.dylib 0x00007fff204ed443 thread_start + 15
Thread 8 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x000070000f8dc000 rcx: 0x000070000f8dafa8 rdx: 0x0000000000000000
rdi: 0x000000000001e967 rsi: 0x0000000000000006 rbp: 0x000070000f8dafd0 rsp: 0x000070000f8dafa8
r8: 0x000070000f8dae70 r9: 0x0000000000000000 r10: 0x0000000000000000 r11: 0x0000000000000246
r12: 0x000000000001e967 r13: 0x0000003000000008 r14: 0x0000000000000006 r15: 0x0000000000000016
rip: 0x00007fff204c292e rfl: 0x0000000000000246 cr2: 0x00007fff87213db8
Logical CPU: 0
Error Code: 0x02000148
Trap Number: 133
Thread 8 instruction stream not available.
Thread 8 last branch register state not available.
Binary Images:
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0x7fff2d1f1000 - 0x7fff2d200fff com.apple.LangAnalysis (1.7.0 - 254) <ACFAC900-9AEC-32D1-8F23-804F111C3092> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
0x7fff2d201000 - 0x7fff2d20bfff com.apple.NetAuth (6.2 - 6.2) <5972DC13-D32F-3140-BD91-495AAC2D7550> /System/Library/PrivateFrameworks/NetAuth.framework/Versions/A/NetAuth
0x7fff2d20c000 - 0x7fff2d213fff com.apple.ColorSyncLegacy (4.13.0 - 1) <4C440F08-211D-3BF7-A43A-57930751CD78> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSyncLegacy.framework/Versions/A/ColorSyncLegacy
0x7fff2d214000 - 0x7fff2d21ffff com.apple.QD (4.0 - 416) <956ADD05-CF77-32BC-A3ED-E3E62969DA53> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
0x7fff2d220000 - 0x7fff2d874fff com.apple.audio.AudioResourceArbitration (1.0 - 1) <A698F07E-EE6B-3193-B8AA-FD560ABE8927> /System/Library/PrivateFrameworks/AudioResourceArbitration.framework/Versions/A/AudioResourceArbitration
0x7fff2d875000 - 0x7fff2d880fff com.apple.perfdata (1.0 - 67.40.1) <7DBB06C3-735E-3105-A8D2-DD22C51FE5D4> /System/Library/PrivateFrameworks/perfdata.framework/Versions/A/perfdata
0x7fff2d881000 - 0x7fff2d88ffff libperfcheck.dylib (41) <515342C4-9932-306C-8A4E-AB2DB9C94D7C> /usr/lib/libperfcheck.dylib
0x7fff2d890000 - 0x7fff2d89ffff com.apple.Kerberos (3.0 - 1) <74519634-F3AC-31A3-8880-B01C3F4C955D> /System/Library/Frameworks/Kerberos.framework/Versions/A/Kerberos
0x7fff2d8a0000 - 0x7fff2d8f0fff com.apple.GSS (4.0 - 2.0) <4B10E99B-A9C7-3C61-85FD-E4BDDEE38764> /System/Library/Frameworks/GSS.framework/Versions/A/GSS
0x7fff2d8f1000 - 0x7fff2d901fff com.apple.CommonAuth (4.0 - 2.0) <B6300458-84A2-3315-903D-195FD5A6D71A> /System/Library/PrivateFrameworks/CommonAuth.framework/Versions/A/CommonAuth
0x7fff2d902000 - 0x7fff2d929fff com.apple.MobileAssets (1.0 - 659.100.21) <0E884E74-0372-38EC-AE4E-3C03169AAB1E> /System/Library/PrivateFrameworks/MobileAsset.framework/Versions/A/MobileAsset
0x7fff2d957000 - 0x7fff2d976fff com.apple.security.KeychainCircle.KeychainCircle (1.0 - 1) <B1E75E61-0B7E-3036-931E-4D0C8E6307FC> /System/Library/PrivateFrameworks/KeychainCircle.framework/Versions/A/KeychainCircle
0x7fff2d977000 - 0x7fff2d97ffff com.apple.CorePhoneNumbers (1.0 - 1) <16382BEE-19B6-3AE5-B450-D037B7D7C19F> /System/Library/PrivateFrameworks/CorePhoneNumbers.framework/Versions/A/CorePhoneNumbers
0x7fff2dad2000 - 0x7fff2dad2fff liblaunch.dylib (2038.120.1) <CA5C47E3-5580-3C92-9603-9404291FAE58> /usr/lib/system/liblaunch.dylib
0x7fff2e2b4000 - 0x7fff2e3fffff com.apple.Sharing (1630 - 1630) <D3B2F86B-1440-3F86-863D-521EFB5E6BF8> /System/Library/PrivateFrameworks/Sharing.framework/Versions/A/Sharing
0x7fff2e400000 - 0x7fff2e521fff com.apple.Bluetooth (8.0.5 - 8.0.5d7) <E5F9D822-9999-3521-A812-6ED6E4B4F7C3> /System/Library/Frameworks/IOBluetooth.framework/Versions/A/IOBluetooth
0x7fff2e53b000 - 0x7fff2e594fff com.apple.ProtectedCloudStorage (1.0 - 1) <87EAE8D8-A80C-3BE3-87EF-A1AA20876D7F> /System/Library/PrivateFrameworks/ProtectedCloudStorage.framework/Versions/A/ProtectedCloudStorage
0x7fff2fcfc000 - 0x7fff2fd23fff com.apple.RemoteViewServices (2.0 - 163) <E7004CD2-22B4-3270-93D5-65863360C82F> /System/Library/PrivateFrameworks/RemoteViewServices.framework/Versions/A/RemoteViewServices
0x7fff2fd24000 - 0x7fff2fd33fff com.apple.SpeechRecognitionCore (6.1.25 - 6.1.25) <CA908EFD-C87F-3DF6-9BE9-43F3B6CE05FF> /System/Library/PrivateFrameworks/SpeechRecognitionCore.framework/Versions/A/SpeechRecognitionCore
0x7fff2fd34000 - 0x7fff2fd3bfff com.apple.speech.recognition.framework (6.0.3 - 6.0.3) <613D2BFE-FCD0-3C2F-8B93-4A01D221AF09> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
0x7fff2ff69000 - 0x7fff2ff69fff libsystem_product_info_filter.dylib (8.40.1) <C983DE00-5802-390A-9FEC-703E0E9A2114> /usr/lib/system/libsystem_product_info_filter.dylib
0x7fff30041000 - 0x7fff30041fff com.apple.Accelerate.vecLib (3.11 - vecLib 3.11) <41FBC9FA-C781-38D3-BA7D-80A0955B350C> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib
0x7fff30067000 - 0x7fff30067fff com.apple.CoreServices (1122.41 - 1122.41) <2E82F706-DA2C-3C97-B244-9053E6E95827> /System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices
0x7fff30223000 - 0x7fff30223fff com.apple.Accelerate (1.11 - Accelerate 1.11) <3F8EDDF5-80E7-3EDD-8746-89A278F04805> /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
0x7fff30264000 - 0x7fff3026ffff com.apple.MediaAccessibility (1.0 - 130) <B119C0F0-04F3-3676-978C-CE1949BEB037> /System/Library/Frameworks/MediaAccessibility.framework/Versions/A/MediaAccessibility
0x7fff30270000 - 0x7fff3028ffff com.apple.networking.AlgosScoreFramework (1.0 - 1) <F6207382-FF8E-3ACA-8488-3DD95D4FFD83> /System/Library/PrivateFrameworks/AlgosScoreFramework.framework/Versions/A/AlgosScoreFramework
0x7fff30a65000 - 0x7fff30acafff com.apple.CoreBluetooth (1.0 - 1) <1A427F92-B95A-3077-853B-09688553DA70> /System/Library/Frameworks/CoreBluetooth.framework/Versions/A/CoreBluetooth
0x7fff30acb000 - 0x7fff30ad4fff com.apple.SymptomDiagnosticReporter (1.0 - 79.120.1) <DC724AF6-1C92-3913-B6A7-0AA062AE1792> /System/Library/PrivateFrameworks/SymptomDiagnosticReporter.framework/Versions/A/SymptomDiagnosticReporter
0x7fff30ae8000 - 0x7fff30af4fff com.apple.AppleIDAuthSupport (1.0 - 1) <A3631052-9D44-308F-BF87-E501AB409692> /System/Library/PrivateFrameworks/AppleIDAuthSupport.framework/Versions/A/AppleIDAuthSupport
0x7fff30af5000 - 0x7fff30b9dfff com.apple.DiscRecording (9.0.3 - 9030.4.5) <367204EF-650E-36BE-8D0F-9DF6E79E5DB0> /System/Library/Frameworks/DiscRecording.framework/Versions/A/DiscRecording
0x7fff30b9e000 - 0x7fff30bd1fff com.apple.MediaKit (16 - 927.40.2) <5198B786-444D-3CA6-85AC-6555688B0DBC> /System/Library/PrivateFrameworks/MediaKit.framework/Versions/A/MediaKit
0x7fff30bd2000 - 0x7fff30cbdfff com.apple.DiskManagement (14.0 - 1733.140.2) <2D63F3D0-8E51-3337-8EB7-A774020B129C> /System/Library/PrivateFrameworks/DiskManagement.framework/Versions/A/DiskManagement
0x7fff30cbe000 - 0x7fff31078fff com.apple.CoreAUC (326.2.0 - 326.2.0) <B8C28937-6F13-398D-90C0-AFA712ECA059> /System/Library/PrivateFrameworks/CoreAUC.framework/Versions/A/CoreAUC
0x7fff31079000 - 0x7fff3107cfff com.apple.Mangrove (1.0 - 25) <991665A3-572E-3648-B92E-EEEF8E6D5EDB> /System/Library/PrivateFrameworks/Mangrove.framework/Versions/A/Mangrove
0x7fff3107d000 - 0x7fff310aafff com.apple.CoreAVCHD (6.1.0 - 6100.4.1) <2D678684-A8A3-366B-9447-E729D550ADAF> /System/Library/PrivateFrameworks/CoreAVCHD.framework/Versions/A/CoreAVCHD
0x7fff310ab000 - 0x7fff311fafff com.apple.FileProvider (349.4.2 - 349.4.2) <B8F18BEE-4ACC-38E3-AE8C-C9AB29CF0206> /System/Library/Frameworks/FileProvider.framework/Versions/A/FileProvider
0x7fff311fb000 - 0x7fff3121dfff com.apple.GenerationalStorage (2.0 - 323) <623FEAF8-671F-3812-9EA4-7B30FFC4AE7D> /System/Library/PrivateFrameworks/GenerationalStorage.framework/Versions/A/GenerationalStorage
0x7fff31a67000 - 0x7fff31aa6fff com.apple.AppleVPAFramework (3.26.1 - 3.26.1) <7EBDBEE9-B0DF-3D58-A28C-036E95F53526> /System/Library/PrivateFrameworks/AppleVPA.framework/Versions/A/AppleVPA
0x7fff31b59000 - 0x7fff31b94fff com.apple.DebugSymbols (195.1 - 195.1) <A0FA2F40-271B-3CC7-8083-A34E21093536> /System/Library/PrivateFrameworks/DebugSymbols.framework/Versions/A/DebugSymbols
0x7fff31b95000 - 0x7fff31c4afff com.apple.CoreSymbolication (12.5 - 64544.81.1) <CE5694DC-0351-3F11-8850-19A9AB721893> /System/Library/PrivateFrameworks/CoreSymbolication.framework/Versions/A/CoreSymbolication
0x7fff32b59000 - 0x7fff32bbcfff com.apple.framework.Apple80211 (17.0 - 1728) <E1BB392A-D496-383C-9B5A-08D695D14FD9> /System/Library/PrivateFrameworks/Apple80211.framework/Versions/A/Apple80211
0x7fff32bbd000 - 0x7fff32d0efff com.apple.CoreWiFi (3.0 - 341) <30F0EC33-A723-3637-BAEE-746E62173413> /System/Library/PrivateFrameworks/CoreWiFi.framework/Versions/A/CoreWiFi
0x7fff32fec000 - 0x7fff32feffff com.apple.help (1.3.8 - 71) <34572384-05BC-3A0A-86CD-267DE196F27A> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Help.framework/Versions/A/Help
0x7fff32ff0000 - 0x7fff32ff7fff com.apple.EFILogin (2.0 - 2) <B6D754F1-9575-3000-BF81-55B0B7A83804> /System/Library/PrivateFrameworks/EFILogin.framework/Versions/A/EFILogin
0x7fff32ff8000 - 0x7fff33003fff libcsfde.dylib (554.140.2) <7D24C26A-8165-33ED-8255-43B52148CD29> /usr/lib/libcsfde.dylib
0x7fff33242000 - 0x7fff33242fff com.apple.ApplicationServices (48 - 50) <93634C11-D92F-38C7-9A9B-52F39C85FCA4> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices
0x7fff33557000 - 0x7fff33557fff libHeimdalProxy.dylib (79) <B7E36A80-D5CF-3C92-B71B-AC5B43E2AAFE> /System/Library/Frameworks/Kerberos.framework/Versions/A/Libraries/libHeimdalProxy.dylib
0x7fff3360a000 - 0x7fff3360afff com.apple.audio.units.AudioUnit (1.14 - 1.14) <097C1991-EEC4-374E-A686-826E479A2A07> /System/Library/Frameworks/AudioUnit.framework/Versions/A/AudioUnit
0x7fff3362e000 - 0x7fff33671fff com.apple.StreamingZip (1.0 - 1) <41BCCD19-E2EF-3864-BCBD-4F576D3B9097> /System/Library/PrivateFrameworks/StreamingZip.framework/Versions/A/StreamingZip
0x7fff345da000 - 0x7fff3462afff com.apple.ChunkingLibrary (334.1 - 334.1) <95D77D1F-5373-3C85-BA2A-48923BA260FA> /System/Library/PrivateFrameworks/ChunkingLibrary.framework/Versions/A/ChunkingLibrary
0x7fff364d6000 - 0x7fff364f9fff com.apple.openscripting (1.7 - 190) <C576593E-47B1-3CEC-BF3A-E3AF1CF3ED05> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/OpenScripting.framework/Versions/A/OpenScripting
0x7fff364fa000 - 0x7fff364fdfff com.apple.securityhi (9.0 - 55008) <E7151ACB-3746-3577-99D5-A606EE14BAB7> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x7fff364fe000 - 0x7fff36501fff com.apple.ink.framework (10.15 - 227) <36F85463-06EA-3DF9-BD13-DED04EDA6B07> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
0x7fff36502000 - 0x7fff36505fff com.apple.CommonPanels (1.2.6 - 101) <F0A710F4-F7AB-3FC4-A12C-C25A3BD07F57> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels
0x7fff36506000 - 0x7fff3650dfff com.apple.ImageCapture (1711.5.2 - 1711.5.2) <4ED1BDC7-C32A-3C40-A7E6-D16E7260BDD7> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x7fff3ca67000 - 0x7fff3ca6afff com.apple.print.framework.Print (15 - 271) <D58D49EE-B123-3053-AEBE-78DD0F6EC66B> /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x7fff3ca6b000 - 0x7fff3ca6efff com.apple.Carbon (160 - 164) <09D6E510-8982-35AC-AE08-1276B69F1781> /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x7fff3cd21000 - 0x7fff3cd40fff com.apple.private.SystemPolicy (1.0 - 1) <F3DFE619-6CBB-3F1F-A8BC-B733B53AD31F> /System/Library/PrivateFrameworks/SystemPolicy.framework/Versions/A/SystemPolicy
0x7fff3d67e000 - 0x7fff3d690fff libmis.dylib (274.140.2) <AAF43CF3-AA45-3247-B281-4436E849D1EC> /usr/lib/libmis.dylib
0x7fff3d691000 - 0x7fff3d694fff com.apple.gpusw.GPURawCounter (20.3 - 12.0) <D3223F20-F183-3D98-967D-AF5E4417E4D3> /System/Library/PrivateFrameworks/GPURawCounter.framework/Versions/A/GPURawCounter
0x7fff40eb9000 - 0x7fff40ec2fff com.apple.IOAccelMemoryInfo (1.0 - 1) <1E0E3901-1823-3EB8-9AE4-586102A90302> /System/Library/PrivateFrameworks/IOAccelMemoryInfo.framework/Versions/A/IOAccelMemoryInfo
0x7fff41345000 - 0x7fff41363fff libCGInterfaces.dylib (544.4) <D5D0AD69-E651-3BE2-B87A-4A035DCD9DBF> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/Libraries/libCGInterfaces.dylib
0x7fff438f2000 - 0x7fff43b65fff com.apple.RawCamera.bundle (9.10.0 - 1450.3) <B52BB328-7FEE-304D-AFE1-532021A21ED6> /System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x7fff46438000 - 0x7fff46443fff libGPUSupportMercury.dylib (18.5.9) <118D2300-226D-337B-9F75-B5A8880E9293> /System/Library/PrivateFrameworks/GPUSupport.framework/Versions/A/Libraries/libGPUSupportMercury.dylib
0x7fff5cfff000 - 0x7fff5d000fff libLatin2Converter.dylib (90) <9FE15271-EE88-374A-883E-303D6BEEE281> /System/Library/CoreServices/Encodings/libLatin2Converter.dylib
0x7fff5ddba000 - 0x7fff5e249fff com.apple.driver.AppleIntelKBLGraphicsMTLDriver (16.5.2 - 16.0.5) <B6C0830D-0992-3489-BFF5-6D8C5027D4F0> /System/Library/Extensions/AppleIntelKBLGraphicsMTLDriver.bundle/Contents/MacOS/AppleIntelKBLGraphicsMTLDriver
0x7fff5e24a000 - 0x7fff5ecadfff libSC.dylib (4.6.20) <C4EEC78B-6BC3-3324-9053-0A68F3F78FD4> /System/Library/Extensions/AMDShared.bundle/Contents/PlugIns/libSC.dylib
0x7fff5efe2000 - 0x7fff5ffc9fff com.apple.driver.AppleIntelKBLGraphicsGLDriver (16.5.2 - 16.0.5) <8241D321-1B03-3B34-9A76-D341BF7D70F2> /System/Library/Extensions/AppleIntelKBLGraphicsGLDriver.bundle/Contents/MacOS/AppleIntelKBLGraphicsGLDriver
0x7fff6977b000 - 0x7fff6977ffff libmetal_timestamp.dylib (31001.192.1) <6DF2DFF7-F8BE-3B77-8C85-0FE5E858F67E> /System/Library/PrivateFrameworks/GPUCompiler.framework/Versions/31001/Libraries/libmetal_timestamp.dylib
0x7fff6bbc6000 - 0x7fff6bbccfff libCoreFSCache.dylib (200.10) <D26083D4-A370-3C8D-A13E-32D69EBF73EF> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreFSCache.dylib
0x7fff6bbcd000 - 0x7fff6bbd1fff libCoreVMClient.dylib (200.10) <E582E0A3-2898-301C-9B5A-A17978ACFAA7> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCoreVMClient.dylib
0x7fff6bbd2000 - 0x7fff6bbe1fff com.apple.opengl (18.5.9 - 18.5.9) <149F2F08-3FD7-3271-945C-238BDCAA3133> /System/Library/Frameworks/OpenGL.framework/Versions/A/OpenGL
0x7fff6bbe2000 - 0x7fff6bbe4fff libCVMSPluginSupport.dylib (18.5.9) <97DC9BD9-1BED-3D17-B499-3967775A011C> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff6bbe5000 - 0x7fff6bbedfff libGFXShared.dylib (18.5.9) <7B502C01-1C03-3388-878B-A0A85223F3A5> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGFXShared.dylib
0x7fff6bbee000 - 0x7fff6bc21fff libGLImage.dylib (18.5.9) <2CCBC785-6F45-33DE-B790-066AF4C69048> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLImage.dylib
0x7fff6bc22000 - 0x7fff6bc5efff libGLU.dylib (18.5.9) <53602650-F093-334F-9D96-2B4FE2359E7A> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLU.dylib
0x7fff6bc5f000 - 0x7fff6bdf2fff libGLProgrammability.dylib (18.5.9) <A85B6455-FB77-3E5E-AD6C-27543EDC4415> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGLProgrammability.dylib
0x7fff6bdf3000 - 0x7fff6bdfdfff libGL.dylib (18.5.9) <9E1A856D-D393-3FDC-ABDF-E29282A6B83E> /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x7fff6bdfe000 - 0x7fff6bf7bfff GLEngine (18.5.9) <42EA70F3-CD0B-3C41-8A78-90AEE7CB0F96> /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLEngine.bundle/GLEngine
0x7fff6bf7c000 - 0x7fff6bfa4fff GLRendererFloat (18.5.9) <4953ACAF-885A-310A-BFDF-777C9627CCDE> /System/Library/Frameworks/OpenGL.framework/Versions/A/Resources/GLRendererFloat.bundle/GLRendererFloat
0x7fff6d23d000 - 0x7fff6d295fff com.apple.opencl (4.6 - 4.6) <5FD1A8D9-17B9-316B-8CA4-6BE553B936CE> /System/Library/Frameworks/OpenCL.framework/Versions/A/OpenCL
0x7fff6e1df000 - 0x7fff6e22efff ATIRadeonX6000SCLib.dylib (4.6.20) <75006034-8B36-37C0-93A2-769147EE3021> /System/Library/Extensions/AMDRadeonX6000GLDriver.bundle/Contents/MacOS/ATIRadeonX6000SCLib.dylib
0x7fff6e33f000 - 0x7fff6e346fff com.apple.agl (3.3.4 - AGL-3.3.3) <C7C621A8-A60D-3486-A4E6-74A1D696A369> /System/Library/Frameworks/AGL.framework/Versions/A/AGL
0x7fff77a71000 - 0x7fff77a78fff libRosetta.dylib (203.58) <A7FFAFB5-B0AB-312E-8EB6-FAF56D76FB7D> /usr/lib/libRosetta.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=775.1M resident=0K(0%) swapped_out_or_unallocated=775.1M(100%)
Writable regions: Total=731.2M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=731.2M(100%)
VIRTUAL REGION
REGION TYPE SIZE COUNT (non-coalesced)
=========== ======= =======
Accelerate framework 384K 3
Activity Tracing 256K 1
CG backing stores 5472K 12
CG image 196K 23
CoreAnimation 249.2M 65
CoreGraphics 16K 3
CoreUI image data 3720K 41
Foundation 16K 1
Kernel Alloc Once 8K 1
MALLOC 327.9M 163
MALLOC guard page 32K 7
MALLOC_NANO (reserved) 384.0M 1 reserved VM address space (unallocated)
STACK GUARD 56.0M 9
Stack 12.1M 9
VM_ALLOCATE 924K 39
__DATA 27.6M 345
__DATA_CONST 14.3M 181
__DATA_DIRTY 565K 103
__FONT_DATA 4K 1
__GLSLBUILTINS 5176K 1
__LINKEDIT 508.2M 30
__OBJC_RO 70.2M 1
__OBJC_RW 2496K 3
__TEXT 266.9M 340
__UNICODE 588K 1
mapped file 95.6M 42
shared memory 780K 18
=========== ======= =======
TOTAL 2.0G 1444
TOTAL, minus reserved VM space 1.6G 1444
Model: MacBookPro16,1, BootROM 1554.140.20.0.0 (iBridge: 18.16.14759.0.1,0), 6 processors, 6-Core Intel Core i7, 2,6 GHz, 16 GB, SMC
Graphics: kHW_IntelUHDGraphics630Item, Intel UHD Graphics 630, spdisplays_builtin
Graphics: kHW_AMDRadeonPro5300MItem, AMD Radeon Pro 5300M, spdisplays_pcie_device, 4 GB
Memory Module: BANK 0/ChannelA-DIMM0, 8 GB, DDR4, 2667 MHz, Micron, 8ATF1G64HZ-2G6E1
Memory Module: BANK 2/ChannelB-DIMM0, 8 GB, DDR4, 2667 MHz, Micron, 8ATF1G64HZ-2G6E1
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Frank Yeh
Aug 25, 2021, 6:28:31 PM8/25/21
to dsi-s...@googlegroups.com
Hi Kamil,
Could you update DSI Studio and see if it works?
If the problem persists, you may upload sample data, and I will check it out and fix the bug.
Best regards,
Frank
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Kamil Lipiński
Sep 6, 2021, 6:48:51 AM9/6/21
to DSI Studio
Dear Dr. Yeh,
Thank you for your reply! I downloaded the latest version, it seems the problem has been solved, and DSI Studio works fine now. Additionally, I wondered if it is possible to perform segmentation based on structural study and then apply it to DWI (using DSI studio only)? What I am looking for is something like FSL provides - FLIRT Registration low res ->high res -> reference, and then FAST segmentation.
Best Regards,
Kamil Lipinski
Frank Yeh
Sep 6, 2021, 9:44:30 AM9/6/21
to dsi-s...@googlegroups.com
Thanks for the suggestion.
I am listing this on the to-do list and hopefully provide this function in the future.
Frank
To view this discussion on the web visit https://groups.google.com/d/msgid/dsi-studio/842a2dc3-50bb-4f36-a261-f267f6c7287dn%40googlegroups.com.
Samuel Hurley
Oct 28, 2021, 11:16:25 AM10/28/21
to DSI Studio
Hello all,
I am also working on a project where this would be really helpful.
We have DTI data acquired over a very limited FOV (limited number of slices) in the rat brain. We would like to be able to perform:
Subject DTI (limited slice coverage) --Linear registration-> Subject Structural --Affine/non-rigid registration--> WHS Rat Atlas
Subject DTI (limited slice coverage) --Linear registration-> Subject Structural --Affine/non-rigid registration--> WHS Rat Atlas
Thanks for your work on this!
Best,
Sam
Frank Yeh
Oct 30, 2021, 11:25:52 AM10/30/21
to dsi-s...@googlegroups.com
The function is updated in the most recent version.
Hope it works for you.
Frank
To view this discussion on the web visit https://groups.google.com/d/msgid/dsi-studio/f8d88f7b-6c83-4ecf-aff0-adf1c9b30571n%40googlegroups.com.
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