Warning: --bval is not used. Please check command line syntax. Warning: --bvecs is not used. Please check command line syntax.

[Edward Saunders]

I am attempting to create an SRC file using dMRI data.nii.gz and the bvecs and bvals matrices. I have directed the proper path directories for the commands, however upon running I am presented with the following error:

`WARNING: passwd file doesn't exist in container, not updating

WARNING: group file doesn't exist in container, not updating

WARNING: container does not have /.singularity.d/actions/exec, calling /opt/dsi-studio/dsi_studio directly

DSI Studio Nov 24 2021 Fang-Cheng Yeh

source=/share/HearingMRI/HighResConn/Subjects/Output/1040891/analysis/dMRI/processed/data/data.nii.gz

action=src

mask used

output=/share/HearingMRI/HighResConn/Subjects/Output/1040891/analysis/dMRI/processed/data/data.src.gz

output src to /share/HearingMRI/HighResConn/Subjects/Output/1040891/analysis/dMRI/processed/data/data.src.gz

sort_b_table=0

up_sampling=0

Warning: --bval is not used. Please check command line syntax.

Warning: --bvecs is not used. Please check command line syntax.`

DSI Studio does successfully create a SRC file, but fails to use the bvals and bvecs matrices provided.

Any ideas?

Thanks,

[Frank Yeh]

If your bval and bvec files are placed with data.nii.gz, it is likely
that DSI Studio found the right one and you don't have to specify bval
and bvec.
Frank

> --
> You received this message because you are subscribed to the Google Groups "DSI Studio" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to dsi-studio+...@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/dsi-studio/3fbb9e94-2fa1-4e43-86fe-7b436f6db459n%40googlegroups.com.

[Edward Saunders]

Ahh, Thank you so much

Apologies for the stupid question!

Thanks,