Josh,
During the patch formation process, every time Dinamica selects a cell, it puts a sliding window centered on that cell and collects the cell neighbors. Then, it selects another cell, among all cells selected previously, and center the sliding window on that cell again, repeating the process.
When a cell that was collected by a previous patch formation process iteration is collected again, its cell probability is multiplied by the isometry factor, possibly increasing or decreasing the chance of selecting that cell in the future.
Best,