DendroPy 4.4.0 has been released!

[Jeet Sukumaran]

2018-05-07

==========

DendroPy 4.4.0 has been released!

-   Calculation of birth-death likelihoods.

-   Bipartitions inherit rooting state of trees.

-   Patristic paths between tips can be tracked in ``PatristicDistanceMatrix``.

-   Character column metadata annotations now actually possible.

-   Standard character matrix defaults to 0-9 alphabet instead of just 01.

-   Reorganization of package directory: from "$HOME/dendropy" and "$HOME/dendropy/test" to more modern "$HOME/src/dendropy" and "$HOME/tests" respectively.

For more information:

    http://dendropy.org

Get it now with:

    $ sudo pip install --upgrade dendropy

or:

    $ sudo pip install -U dendropy

You can install directly from the main GitHub repository using:

    $ pip install git+https://github.com/jeetsukumaran/DendroPy.git

or:

    $ pip install git+git://github.com/jeetsukumaran/DendroPy.git

Or, if you are working out of a local Git repo:

    $ git pull origin

    $ python setup.py build

    $ sudo python setup.py develop

(note: ``sudo`` should be used only if you are installing system-wide using your system Python).