Trouble with Installation
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Siyao Gu
Nov 1, 2019, 10:45:48 AM11/1/19
to deep...@googlegroups.com
Hi,
I'm having trouble installing DeepTools. I've doing it on both Windows Commandline and Anaconda. What do I need to do?
Here are the outputs:
Windows cmdline:
ollecting deeptools
 Using cached https://files.pythonhosted.org/packages/82/8e/d9d4b66b2ce1bd48f1db43357c8eb019ae3e8bb1bb7a9e82667db981e1df/deepTools-3.3.1.tar.gz
Collecting numpy>=1.9.0
 Downloading https://files.pythonhosted.org/packages/90/4e/98818cb208f32833f628d7f7e9dd9ce36cdc34d199ccae0ab37ed6a13b85/numpy-1.17.3-cp38-cp38-win_amd64.whl (12.7MB)
   |████████████████████████████████| 12.7MB 3.2MB/s
Collecting scipy>=0.17.0
 Using cached https://files.pythonhosted.org/packages/ee/5b/5afcd1c46f97b3c2ac3489dbc95d6ca28eacf8e3634e51f495da68d97f0f/scipy-1.3.1.tar.gz
 Using cached https://files.pythonhosted.org/packages/82/8e/d9d4b66b2ce1bd48f1db43357c8eb019ae3e8bb1bb7a9e82667db981e1df/deepTools-3.3.1.tar.gz
Collecting numpy>=1.9.0
 Downloading https://files.pythonhosted.org/packages/90/4e/98818cb208f32833f628d7f7e9dd9ce36cdc34d199ccae0ab37ed6a13b85/numpy-1.17.3-cp38-cp38-win_amd64.whl (12.7MB)
   |████████████████████████████████| 12.7MB 3.2MB/s
Collecting scipy>=0.17.0
 Using cached https://files.pythonhosted.org/packages/ee/5b/5afcd1c46f97b3c2ac3489dbc95d6ca28eacf8e3634e51f495da68d97f0f/scipy-1.3.1.tar.gz
 ERROR: Command errored out with exit status 1:
  command: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' 'c:\users\siyao\appdata\local\programs\python\python38\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- wheel setuptools 'Cython>=0.29.2' 'numpy==1.13.3; python_version=='"'"'3.5'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.13.3; python_version=='"'"'3.6'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.14.5; python_version>='"'"'3.7'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.5'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.6'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version>='"'"'3.7'"'"' and platform_system=='"'"'AIX'"'"''
    cwd: None
 Complete output (343 lines):
 Ignoring numpy: markers 'python_version == "3.5" and platform_system != "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.6" and platform_system != "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.5" and platform_system == "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.6" and platform_system == "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version >= "3.7" and platform_system == "AIX"' don't match your environment
 Collecting wheel
  Using cached https://files.pythonhosted.org/packages/00/83/b4a77d044e78ad1a45610eb88f745be2fd2c6d658f9798a15e384b7d57c9/wheel-0.33.6-py2.py3-none-any.whl
 Collecting setuptools
  Using cached https://files.pythonhosted.org/packages/d9/de/554b6310ac87c5b921bc45634b07b11394fe63bc4cb5176f5240addf18ab/setuptools-41.6.0-py2.py3-none-any.whl
 Collecting Cython>=0.29.2
  Using cached https://files.pythonhosted.org/packages/a5/1f/c7c5450c60a90ce058b47ecf60bb5be2bfe46f952ed1d3b95d1d677588be/Cython-0.29.13.tar.gz
 Collecting numpy==1.14.5
  Using cached https://files.pythonhosted.org/packages/d5/6e/f00492653d0fdf6497a181a1c1d46bbea5a2383e7faf4c8ca6d6f3d2581d/numpy-1.14.5.zip
 Installing collected packages: wheel, setuptools, Cython, numpy
   Running setup.py install for Cython: started
   Running setup.py install for Cython: finished with status 'error'
   ERROR: Command errored out with exit status 1:
    command: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record 'C:\Users\Siyao\AppData\Local\Temp\pip-record-cjvzil4s\install-record.txt' --single-version-externally-managed --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --compile
      cwd: C:\Users\Siyao\AppData\Local\Temp\pip-install-u39yw_12\Cython\
   Complete output (321 lines):
   Unable to find pgen, not compiling formal grammar.
   running install
   running build
   running build_py
   creating build
   creating build\lib.win-amd64-3.8
   copying cython.py -> build\lib.win-amd64-3.8
   creating build\lib.win-amd64-3.8\Cython
   copying Cython\CodeWriter.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Coverage.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Debugging.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Shadow.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\StringIOTree.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\TestUtils.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Utils.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\__init__.py -> build\lib.win-amd64-3.8\Cython
   creating build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\BuildExecutable.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Cythonize.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Dependencies.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Distutils.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Inline.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\IpythonMagic.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\__init__.py -> build\lib.win-amd64-3.8\Cython\Build
   creating build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\AnalysedTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Annotate.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\AutoDocTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Buffer.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Builtin.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CmdLine.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Code.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CodeGeneration.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CythonScope.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\DebugFlags.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Errors.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ExprNodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FlowControl.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FusedNode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Future.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Interpreter.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Lexicon.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Main.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\MemoryView.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ModuleNode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Naming.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Nodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Optimize.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Options.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ParseTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Parsing.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Pipeline.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\PyrexTypes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Pythran.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Scanning.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\StringEncoding.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Symtab.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TreeFragment.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TreePath.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TypeInference.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TypeSlots.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\UtilityCode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\UtilNodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Version.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Visitor.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\__init__.py -> build\lib.win-amd64-3.8\Cython\Compiler
   creating build\lib.win-amd64-3.8\Cython\Runtime
   copying Cython\Runtime\__init__.py -> build\lib.win-amd64-3.8\Cython\Runtime
   creating build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\build_ext.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\extension.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\old_build_ext.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\__init__.py -> build\lib.win-amd64-3.8\Cython\Distutils
   creating build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\Cygdb.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\DebugWriter.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\libcython.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\libpython.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\__init__.py -> build\lib.win-amd64-3.8\Cython\Debugger
   creating build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\TestLibCython.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\test_libcython_in_gdb.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\test_libpython_in_gdb.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   creating build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Actions.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\DFA.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Errors.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Lexicons.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Machines.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Regexps.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Scanners.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Timing.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Traditional.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Transitions.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\__init__.py -> build\lib.win-amd64-3.8\Cython\Plex
   creating build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestCodeWriter.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestCythonUtils.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestJediTyper.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestStringIOTree.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\xmlrunner.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Tests
   creating build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestCyCache.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestInline.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestIpythonMagic.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestStripLiterals.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   creating build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestBuffer.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestCmdLine.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestFlowControl.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestGrammar.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestMemView.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestParseTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestSignatureMatching.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTreeFragment.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTreePath.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTypes.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestUtilityLoad.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestVisitor.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   creating build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\__init__.py -> build\lib.win-amd64-3.8\Cython\Utility
   creating build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\compat3.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\_looper.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\_tempita.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\__init__.py -> build\lib.win-amd64-3.8\Cython\Tempita
   creating build\lib.win-amd64-3.8\pyximport
   copying pyximport\pyxbuild.py -> build\lib.win-amd64-3.8\pyximport
   copying pyximport\pyximport.py -> build\lib.win-amd64-3.8\pyximport
   copying pyximport\__init__.py -> build\lib.win-amd64-3.8\pyximport
   creating build\lib.win-amd64-3.8\Cython\Includes
   copying Cython\Includes\openmp.pxd -> build\lib.win-amd64-3.8\Cython\Includes
   creating build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\array.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bool.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\buffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bytearray.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bytes.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\ceval.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\cobject.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\datetime.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\dict.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\exc.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\function.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\getargs.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\instance.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\int.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\long.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\longintrepr.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\mapping.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\mem.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\method.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\module.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\number.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\object.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\oldbuffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pycapsule.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pylifecycle.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pystate.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pythread.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\ref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\sequence.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\slice.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\tuple.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\type.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\unicode.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\version.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\weakref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   creating build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_bool.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_buffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_bytes.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_cobject.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_dict.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_exc.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_function.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_getargs.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_instance.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_int.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_long.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_mapping.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_mem.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_method.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_module.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_number.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_object.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_oldbuffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_pycapsule.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_ref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_sequence.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_tuple.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_type.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_unicode.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_version.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_weakref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   creating build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\errno.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\limits.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\locale.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\math.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\setjmp.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\signal.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stddef.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdint.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\time.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   creating build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\algorithm.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\cast.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\deque.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\forward_list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\functional.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\limits.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\map.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\memory.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\pair.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\queue.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\stack.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\typeindex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\typeinfo.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\unordered_map.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\unordered_set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\utility.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\vector.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   creating build\lib.win-amd64-3.8\Cython\Includes\numpy
   copying Cython\Includes\numpy\math.pxd -> build\lib.win-amd64-3.8\Cython\Includes\numpy
   copying Cython\Includes\numpy\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\numpy
   creating build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\dlfcn.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\fcntl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\ioctl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\mman.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\resource.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\select.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\signal.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stat.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\strings.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\time.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\types.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\unistd.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\wait.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Compiler\Code.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FlowControl.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ParseTreeTransforms.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Parsing.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Scanning.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Visitor.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Runtime\refnanny.pyx -> build\lib.win-amd64-3.8\Cython\Runtime
   copying Cython\Debugger\Tests\codefile -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\cfuncs.c -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Plex\Actions.pxd -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Scanners.pxd -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Utility\CConvert.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CpdefEnums.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CppConvert.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\MemoryView.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestCythonScope.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestCyUtilityLoader.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\AsyncGen.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Buffer.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Builtins.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Capsule.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CMath.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CommonStructures.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Complex.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Coroutine.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CythonFunction.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Embed.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Exceptions.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ExtensionTypes.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\FunctionArguments.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ImportExport.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\MemoryView_C.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ModuleSetupCode.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ObjectHandling.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Optimize.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Overflow.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Printing.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Profile.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\StringTools.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestUtilityLoader.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TypeConversion.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\arrayarray.h -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CppSupport.cpp -> build\lib.win-amd64-3.8\Cython\Utility
   running build_ext
   building 'Cython.Plex.Scanners' extension
   error: Microsoft Visual C++ 14.0 is required. Get it with "Microsoft Visual C++ Build Tools": https://visualstudio.microsoft.com/downloads/
   ----------------------------------------
 ERROR: Command errored out with exit status 1: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record 'C:\Users\Siyao\AppData\Local\Temp\pip-record-cjvzil4s\install-record.txt' --single-version-externally-managed --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --compile Check the logs for full command output.
 ----------------------------------------
ERROR: Command errored out with exit status 1: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' 'c:\users\siyao\appdata\local\programs\python\python38\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- wheel setuptools 'Cython>=0.29.2' 'numpy==1.13.3; python_version=='"'"'3.5'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.13.3; python_version=='"'"'3.6'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.14.5; python_version>='"'"'3.7'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.5'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.6'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version>='"'"'3.7'"'"' and platform_system=='"'"'AIX'"'"'' Check the logs for full command output.
  command: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' 'c:\users\siyao\appdata\local\programs\python\python38\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- wheel setuptools 'Cython>=0.29.2' 'numpy==1.13.3; python_version=='"'"'3.5'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.13.3; python_version=='"'"'3.6'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.14.5; python_version>='"'"'3.7'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.5'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.6'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version>='"'"'3.7'"'"' and platform_system=='"'"'AIX'"'"''
    cwd: None
 Complete output (343 lines):
 Ignoring numpy: markers 'python_version == "3.5" and platform_system != "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.6" and platform_system != "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.5" and platform_system == "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version == "3.6" and platform_system == "AIX"' don't match your environment
 Ignoring numpy: markers 'python_version >= "3.7" and platform_system == "AIX"' don't match your environment
 Collecting wheel
  Using cached https://files.pythonhosted.org/packages/00/83/b4a77d044e78ad1a45610eb88f745be2fd2c6d658f9798a15e384b7d57c9/wheel-0.33.6-py2.py3-none-any.whl
 Collecting setuptools
  Using cached https://files.pythonhosted.org/packages/d9/de/554b6310ac87c5b921bc45634b07b11394fe63bc4cb5176f5240addf18ab/setuptools-41.6.0-py2.py3-none-any.whl
 Collecting Cython>=0.29.2
  Using cached https://files.pythonhosted.org/packages/a5/1f/c7c5450c60a90ce058b47ecf60bb5be2bfe46f952ed1d3b95d1d677588be/Cython-0.29.13.tar.gz
 Collecting numpy==1.14.5
  Using cached https://files.pythonhosted.org/packages/d5/6e/f00492653d0fdf6497a181a1c1d46bbea5a2383e7faf4c8ca6d6f3d2581d/numpy-1.14.5.zip
 Installing collected packages: wheel, setuptools, Cython, numpy
   Running setup.py install for Cython: started
   Running setup.py install for Cython: finished with status 'error'
   ERROR: Command errored out with exit status 1:
    command: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record 'C:\Users\Siyao\AppData\Local\Temp\pip-record-cjvzil4s\install-record.txt' --single-version-externally-managed --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --compile
      cwd: C:\Users\Siyao\AppData\Local\Temp\pip-install-u39yw_12\Cython\
   Complete output (321 lines):
   Unable to find pgen, not compiling formal grammar.
   running install
   running build
   running build_py
   creating build
   creating build\lib.win-amd64-3.8
   copying cython.py -> build\lib.win-amd64-3.8
   creating build\lib.win-amd64-3.8\Cython
   copying Cython\CodeWriter.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Coverage.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Debugging.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Shadow.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\StringIOTree.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\TestUtils.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\Utils.py -> build\lib.win-amd64-3.8\Cython
   copying Cython\__init__.py -> build\lib.win-amd64-3.8\Cython
   creating build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\BuildExecutable.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Cythonize.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Dependencies.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Distutils.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\Inline.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\IpythonMagic.py -> build\lib.win-amd64-3.8\Cython\Build
   copying Cython\Build\__init__.py -> build\lib.win-amd64-3.8\Cython\Build
   creating build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\AnalysedTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Annotate.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\AutoDocTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Buffer.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Builtin.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CmdLine.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Code.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CodeGeneration.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\CythonScope.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\DebugFlags.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Errors.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ExprNodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FlowControl.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FusedNode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Future.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Interpreter.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Lexicon.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Main.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\MemoryView.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ModuleNode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Naming.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Nodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Optimize.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Options.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ParseTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Parsing.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Pipeline.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\PyrexTypes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Pythran.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Scanning.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\StringEncoding.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Symtab.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TreeFragment.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TreePath.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TypeInference.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\TypeSlots.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\UtilityCode.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\UtilNodes.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Version.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Visitor.py -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\__init__.py -> build\lib.win-amd64-3.8\Cython\Compiler
   creating build\lib.win-amd64-3.8\Cython\Runtime
   copying Cython\Runtime\__init__.py -> build\lib.win-amd64-3.8\Cython\Runtime
   creating build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\build_ext.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\extension.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\old_build_ext.py -> build\lib.win-amd64-3.8\Cython\Distutils
   copying Cython\Distutils\__init__.py -> build\lib.win-amd64-3.8\Cython\Distutils
   creating build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\Cygdb.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\DebugWriter.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\libcython.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\libpython.py -> build\lib.win-amd64-3.8\Cython\Debugger
   copying Cython\Debugger\__init__.py -> build\lib.win-amd64-3.8\Cython\Debugger
   creating build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\TestLibCython.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\test_libcython_in_gdb.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\test_libpython_in_gdb.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   creating build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Actions.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\DFA.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Errors.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Lexicons.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Machines.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Regexps.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Scanners.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Timing.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Traditional.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Transitions.py -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\__init__.py -> build\lib.win-amd64-3.8\Cython\Plex
   creating build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestCodeWriter.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestCythonUtils.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestJediTyper.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\TestStringIOTree.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\xmlrunner.py -> build\lib.win-amd64-3.8\Cython\Tests
   copying Cython\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Tests
   creating build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestCyCache.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestInline.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestIpythonMagic.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\TestStripLiterals.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   copying Cython\Build\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Build\Tests
   creating build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestBuffer.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestCmdLine.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestFlowControl.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestGrammar.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestMemView.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestParseTreeTransforms.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestSignatureMatching.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTreeFragment.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTreePath.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestTypes.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestUtilityLoad.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\TestVisitor.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   copying Cython\Compiler\Tests\__init__.py -> build\lib.win-amd64-3.8\Cython\Compiler\Tests
   creating build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\__init__.py -> build\lib.win-amd64-3.8\Cython\Utility
   creating build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\compat3.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\_looper.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\_tempita.py -> build\lib.win-amd64-3.8\Cython\Tempita
   copying Cython\Tempita\__init__.py -> build\lib.win-amd64-3.8\Cython\Tempita
   creating build\lib.win-amd64-3.8\pyximport
   copying pyximport\pyxbuild.py -> build\lib.win-amd64-3.8\pyximport
   copying pyximport\pyximport.py -> build\lib.win-amd64-3.8\pyximport
   copying pyximport\__init__.py -> build\lib.win-amd64-3.8\pyximport
   creating build\lib.win-amd64-3.8\Cython\Includes
   copying Cython\Includes\openmp.pxd -> build\lib.win-amd64-3.8\Cython\Includes
   creating build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\array.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bool.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\buffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bytearray.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\bytes.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\ceval.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\cobject.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\datetime.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\dict.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\exc.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\function.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\getargs.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\instance.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\int.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\long.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\longintrepr.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\mapping.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\mem.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\method.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\module.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\number.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\object.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\oldbuffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pycapsule.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pylifecycle.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pystate.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\pythread.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\ref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\sequence.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\slice.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\tuple.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\type.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\unicode.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\version.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\weakref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   copying Cython\Includes\cpython\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\cpython
   creating build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_bool.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_buffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_bytes.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_cobject.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_dict.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_exc.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_function.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_getargs.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_instance.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_int.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_long.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_mapping.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_mem.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_method.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_module.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_number.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_object.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_oldbuffer.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_pycapsule.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_ref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_sequence.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_tuple.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_type.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_unicode.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_version.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\python_weakref.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   copying Cython\Includes\Deprecated\stl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\Deprecated
   creating build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\errno.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\float.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\limits.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\locale.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\math.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\setjmp.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\signal.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stddef.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdint.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\time.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   copying Cython\Includes\libc\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libc
   creating build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\algorithm.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\cast.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\complex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\deque.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\forward_list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\functional.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\iterator.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\limits.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\list.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\map.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\memory.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\pair.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\queue.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\stack.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\string.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\typeindex.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\typeinfo.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\unordered_map.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\unordered_set.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\utility.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\vector.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   copying Cython\Includes\libcpp\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\libcpp
   creating build\lib.win-amd64-3.8\Cython\Includes\numpy
   copying Cython\Includes\numpy\math.pxd -> build\lib.win-amd64-3.8\Cython\Includes\numpy
   copying Cython\Includes\numpy\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\numpy
   creating build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\dlfcn.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\fcntl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\ioctl.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\mman.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\resource.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\select.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\signal.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stat.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stdio.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\stdlib.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\strings.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\time.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\types.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\unistd.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\wait.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Includes\posix\__init__.pxd -> build\lib.win-amd64-3.8\Cython\Includes\posix
   copying Cython\Compiler\Code.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\FlowControl.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\ParseTreeTransforms.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Parsing.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Scanning.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Compiler\Visitor.pxd -> build\lib.win-amd64-3.8\Cython\Compiler
   copying Cython\Runtime\refnanny.pyx -> build\lib.win-amd64-3.8\Cython\Runtime
   copying Cython\Debugger\Tests\codefile -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Debugger\Tests\cfuncs.c -> build\lib.win-amd64-3.8\Cython\Debugger\Tests
   copying Cython\Plex\Actions.pxd -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Plex\Scanners.pxd -> build\lib.win-amd64-3.8\Cython\Plex
   copying Cython\Utility\CConvert.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CpdefEnums.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CppConvert.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\MemoryView.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestCythonScope.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestCyUtilityLoader.pyx -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\AsyncGen.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Buffer.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Builtins.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Capsule.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CMath.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CommonStructures.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Complex.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Coroutine.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CythonFunction.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Embed.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Exceptions.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ExtensionTypes.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\FunctionArguments.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ImportExport.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\MemoryView_C.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ModuleSetupCode.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\ObjectHandling.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Optimize.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Overflow.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Printing.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\Profile.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\StringTools.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TestUtilityLoader.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\TypeConversion.c -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\arrayarray.h -> build\lib.win-amd64-3.8\Cython\Utility
   copying Cython\Utility\CppSupport.cpp -> build\lib.win-amd64-3.8\Cython\Utility
   running build_ext
   building 'Cython.Plex.Scanners' extension
   error: Microsoft Visual C++ 14.0 is required. Get it with "Microsoft Visual C++ Build Tools": https://visualstudio.microsoft.com/downloads/
   ----------------------------------------
 ERROR: Command errored out with exit status 1: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-u39yw_12\\Cython\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record 'C:\Users\Siyao\AppData\Local\Temp\pip-record-cjvzil4s\install-record.txt' --single-version-externally-managed --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --compile Check the logs for full command output.
 ----------------------------------------
ERROR: Command errored out with exit status 1: 'c:\users\siyao\appdata\local\programs\python\python38\python.exe' 'c:\users\siyao\appdata\local\programs\python\python38\lib\site-packages\pip' install --ignore-installed --no-user --prefix 'C:\Users\Siyao\AppData\Local\Temp\pip-build-env-go603ej2\overlay' --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- wheel setuptools 'Cython>=0.29.2' 'numpy==1.13.3; python_version=='"'"'3.5'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.13.3; python_version=='"'"'3.6'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.14.5; python_version>='"'"'3.7'"'"' and platform_system!='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.5'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version=='"'"'3.6'"'"' and platform_system=='"'"'AIX'"'"'' 'numpy==1.16.0; python_version>='"'"'3.7'"'"' and platform_system=='"'"'AIX'"'"'' Check the logs for full command output.
Anaconda:
Collecting deeptools
 Using cached https://files.pythonhosted.org/packages/82/8e/d9d4b66b2ce1bd48f1db43357c8eb019ae3e8bb1bb7a9e82667db981e1df/deepTools-3.3.1.tar.gz
Requirement already satisfied: numpy>=1.9.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (1.16.5)
Requirement already satisfied: scipy>=0.17.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (1.3.1)
Requirement already satisfied: matplotlib>=3.0.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (3.1.1)
Collecting pysam>=0.14.0 (from deeptools)
 Using cached https://files.pythonhosted.org/packages/15/e7/2dab8bb0ac739555e69586f1492f0ff6bc4a1f8312992a83001d3deb77ac/pysam-0.15.3.tar.gz
 Using cached https://files.pythonhosted.org/packages/82/8e/d9d4b66b2ce1bd48f1db43357c8eb019ae3e8bb1bb7a9e82667db981e1df/deepTools-3.3.1.tar.gz
Requirement already satisfied: numpy>=1.9.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (1.16.5)
Requirement already satisfied: scipy>=0.17.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (1.3.1)
Requirement already satisfied: matplotlib>=3.0.0 in c:\users\siyao\anaconda3\lib\site-packages (from deeptools) (3.1.1)
Collecting pysam>=0.14.0 (from deeptools)
 Using cached https://files.pythonhosted.org/packages/15/e7/2dab8bb0ac739555e69586f1492f0ff6bc4a1f8312992a83001d3deb77ac/pysam-0.15.3.tar.gz
  ERROR: Command errored out with exit status 1:
   command: 'C:\Users\Siyao\Anaconda3\python.exe' -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-9fpr2a4o\\pysam\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-9fpr2a4o\\pysam\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base pip-egg-info
     cwd: C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\
  Complete output (23 lines):
  # pysam: cython is available - using cythonize if necessary
  # pysam: htslib mode is shared
  # pysam: HTSLIB_CONFIGURE_OPTIONS=None
  '.' is not recognized as an internal or external command,
  operable program or batch file.
  '.' is not recognized as an internal or external command,
  operable program or batch file.
  # pysam: htslib configure options: None
  Traceback (most recent call last):
   File "<string>", line 1, in <module>
   File "C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\setup.py", line 241, in <module>
    htslib_make_options = run_make_print_config()
   File "C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\setup.py", line 68, in run_make_print_config
    stdout = subprocess.check_output(["make", "-s", "print-config"])
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 395, in check_output
    **kwargs).stdout
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 472, in run
    with Popen(*popenargs, **kwargs) as process:
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 775, in __init__
    restore_signals, start_new_session)
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 1178, in _execute_child
    startupinfo)
  FileNotFoundError: [WinError 2] The system cannot find the file specified
  ----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
-- Â Â Â command: 'C:\Users\Siyao\Anaconda3\python.exe' -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-9fpr2a4o\\pysam\\setup.py'"'"'; __file__='"'"'C:\\Users\\Siyao\\AppData\\Local\\Temp\\pip-install-9fpr2a4o\\pysam\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base pip-egg-info
     cwd: C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\
  Complete output (23 lines):
  # pysam: cython is available - using cythonize if necessary
  # pysam: htslib mode is shared
  # pysam: HTSLIB_CONFIGURE_OPTIONS=None
  '.' is not recognized as an internal or external command,
  operable program or batch file.
  '.' is not recognized as an internal or external command,
  operable program or batch file.
  # pysam: htslib configure options: None
  Traceback (most recent call last):
   File "<string>", line 1, in <module>
   File "C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\setup.py", line 241, in <module>
    htslib_make_options = run_make_print_config()
   File "C:\Users\Siyao\AppData\Local\Temp\pip-install-9fpr2a4o\pysam\setup.py", line 68, in run_make_print_config
    stdout = subprocess.check_output(["make", "-s", "print-config"])
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 395, in check_output
    **kwargs).stdout
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 472, in run
    with Popen(*popenargs, **kwargs) as process:
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 775, in __init__
    restore_signals, start_new_session)
   File "C:\Users\Siyao\Anaconda3\lib\subprocess.py", line 1178, in _execute_child
    startupinfo)
  FileNotFoundError: [WinError 2] The system cannot find the file specified
  ----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
Best Regards,
Siyao Gu
Siyao Gu
Devon Ryan
Nov 1, 2019, 2:52:21 PM11/1/19
to Siyao Gu, deepTools
You'll have to try the Linux subsystem under Windows 10. Like most
bioinformatics programs, we don't otherwise support Windows.
Devon
--
Devon Ryan, Ph.D.
Email: dpr...@dpryan.com
Data Manager/Bioinformatician
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51
79108 Freiburg
Germany
> --
> You received this message because you are subscribed to the Google Groups "deepTools" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to deeptools+...@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/deeptools/CABuPeyGt16iuZwPYKEeFdp3U4Mxw%3DTYMLDexYQhxhWsapdL2Zg%40mail.gmail.com.
bioinformatics programs, we don't otherwise support Windows.
Devon
--
Devon Ryan, Ph.D.
Email: dpr...@dpryan.com
Data Manager/Bioinformatician
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51
79108 Freiburg
Germany
> You received this message because you are subscribed to the Google Groups "deepTools" group.
> To unsubscribe from this group and stop receiving emails from it, send an email to deeptools+...@googlegroups.com.
> To view this discussion on the web visit https://groups.google.com/d/msgid/deeptools/CABuPeyGt16iuZwPYKEeFdp3U4Mxw%3DTYMLDexYQhxhWsapdL2Zg%40mail.gmail.com.
Siyao Gu
Nov 4, 2019, 3:22:51 PM11/4/19
to Devon Ryan, deepTools
I tried installing on Ubuntu, and it gave me
Could not find a version that satisfies the requirement matplotlib>=3.0.0 (from deeptools) (from versions: 0.86, 0.86.1, 0.86.2, 0.91.0, 0.91.1, 1.0.1, 1.1.0, 1.1.1, 1.2.0, 1.2.1, 1.3.0, 1.3.1, 1.4.0, 1.4.1rc1, 1.4.1, 1.4.2, 1.4.3, 1.5.0, 1.5.1, 1.5.2, 1.5.3, 2.0.0b1, 2.0.0b2, 2.0.0b3, 2.0.0b4, 2.0.0rc1, 2.0.0rc2, 2.0.0, 2.0.1, 2.0.2, 2.1.0rc1, 2.1.0, 2.1.1, 2.1.2, 2.2.0rc1, 2.2.0, 2.2.2, 2.2.3, 2.2.4)
No matching distribution found for matplotlib>=3.0.0 (from deeptools)
No matching distribution found for matplotlib>=3.0.0 (from deeptools)
I installed matplotlib already
Devon Ryan
Nov 4, 2019, 3:59:50 PM11/4/19
to Siyao Gu, deepTools
It sounds like you're using python2, which has reached its end of life
and is no longer supported by recent matplotlib releases. Either use
python 3 or install an older version of deepTools (I think 3.1.1
should work) that supports matplotlib versions <3.
Devon
--
Devon Ryan, Ph.D.
Email: dpr...@dpryan.com
Data Manager/Bioinformatician
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51
79108 Freiburg
Germany
> To view this discussion on the web visit https://groups.google.com/d/msgid/deeptools/CABuPeyFmZJZ392RfWQd5sAbb72fhmbu65aeicgucaf%3DW1aNLng%40mail.gmail.com.
and is no longer supported by recent matplotlib releases. Either use
python 3 or install an older version of deepTools (I think 3.1.1
should work) that supports matplotlib versions <3.
Devon
--
Devon Ryan, Ph.D.
Email: dpr...@dpryan.com
Data Manager/Bioinformatician
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51
79108 Freiburg
Germany
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