New Deducer Plug-in gMCP

[Ian Fellows]

Hi all,

There is a new package gMCP on CRAN that plugs into Deducer.

------------------------------------------
gMCP: A graphical approach to sequentially rejective multiple test procedures

This package provides functions and a graphical user interface for
graphical described sequentially rejective multiple test procedures
------------------------------------------

Though it is in its early stages of development, it looks like a very
promising and interesting package.

As it makes it's way through CRAN, it can be installed with:
install.packages("gMCP",type="source")

More information including a vignette is available on the cran package
page: http://cran.r-project.org/web/packages/gMCP/index.html

Ian

[Bruce Miller]

Any fix yet for the Save as" option with the latest Deducer?
Crashes when trying to save PNG or other formats.

--
Bruce W. Miller, Ph.D.
Conservation Ecologist
Neotropical Bat Project

office details
Gallon Jug, Belize
Mailing address
P.O. Box 37, Belize City
Belize, Central America
Phone +501-220-9002

[Ian Fellows]

I am unable to replicate the issue on either mac or windows. has a
JGRError.log file been created. if so, attach it.

cheers,
ian

[Bruce Miller]

Ian,

found the error log and sent to your email address since Google groups
do not take attachments.

[Ian Fellows]

The error log was not very informative. just an unrelated bookkeeping error.

First, make sure all your packages are up-to-date using: update.packages()

Then restart JGR.

Try the following.
1. open JGR with only the default packages (not Deducer).

2. Enter:
plot(1:10)

3. Try to save as png through the "Save as PNG" menu item

4. Enter the following:
.jgr.save.JavaGD.as(png,2,"sass.png",units="in",res=72)

5. in JGR and in the regular R gui enter:
png("png.png")
plot(1:10)
dev.off()

Were you able to save through the menu? do you see sass.png in your
working dir? what about png.png? Any crashes?

Then try the same thing with Deducer loaded.

Ian

[Bruce Miller]

OK Tnx Ian

I have updated all packages early in the week.
So that part should be fine.

results of your test steps:

1. open JGR with only the default packages (not Deducer).

2. Enter:
plot(1:10)

Plots OK

3. Try to save as png through the "Save as PNG" menu item

CRASH!!!!!!!!!!!!!!!!!!!!!!!!!

4. Enter the following:
.jgr.save.JavaGD.as(png,2,"sass.png",units="in",res=72)

5. in JGR and in the regular R gui enter:
png("png.png")
plot(1:10)
dev.off()

No crash.

The file sass.png is in the working DIR but is blank
The file png.png is the plot
No crash with that

Bruce

[Ian Fellows]

regarding the blank plot, can you try

plot(1:10)
.jgr.save.JavaGD.as(png,dev.cur(),"sass.png",units="in",res=244)

instead.

ian

[Bruce Miller]

Ian,

That worked and saved the sass.png plot in working DIR.
If I try the Save as * option from the JavaGD window it crashes.

, Ian Fellows wrote:
> plot(1:10)
> .jgr.save.JavaGD.as(png,dev.cur(),"sass.png",units="in",res=244)