Eigentools

[Andrew Cook]

Hi all,

I have been interested in using eigen tools, but I usually just use dedalus 3 so I downloaded dedalus 2 following the custom conda installation on the documentation and downloaded eigen tools.

Attached is the script I used, I want to check that I am solving the example problems correctly before anything else. Below is the error I am getting 

Traceback (most recent call last):
  File "/home/aj/conda/envs/dedalus2/OrrStrom.py", line 46, in <module>
    EP.solve(sparse=False)
  File "/home/aj/conda/envs/dedalus2/lib/python3.12/site-packages/eigentools/eigenproblem.py", line 153, in solve
    self._run_solver(self.solver, sparse)
  File "/home/aj/conda/envs/dedalus2/lib/python3.12/site-packages/eigentools/eigenproblem.py", line 177, in _run_solver
    solver.solve_dense(solver.pencils[self.pencil], rebuild_coeffs=True)
  File "/home/aj/conda/envs/dedalus2/lib/python3.12/site-packages/dedalus/core/solvers.py", line 102, in solve_dense
    eig_output = eig(pencil.L_exp.A, b=-pencil.M_exp.A, **kw)
                     ^^^^^^^^^^^^^^

I think something is wrong with my installation, but I am not sure what. To install dedalus2

I just ran this to get the bash command as the documentation says 

1. curl https://raw.githubusercontent.com/DedalusProject/dedalus_conda/master/conda_install_dedalus2.sh --output conda_install_dedalus2.sh
2. ran the bash scrip

-Andrew