Docker and Eclipse
andrew jack urombo
I am running dealii on Docker, and now would like to debug my projects using Eclipse.
1. How do you that so that Eclipse recognise the dealii that is in a container and work in sync?
Why I am not running a compiled dealii is because I am getting this error with log ending:
/usr/lib64/gcc/x86_64-suse-linux/11/../../../../x86_64-suse-linux/bin/ld:
CMakeFiles/step_3_simplex.debug.dir/doxygen/step_3_simplex.cc.o:(.data.rel.ro._ZTVN6dealii13FiniteElementILi2ELi2EE16InternalDataBaseE[_ZTVN6dealii13FiniteElementILi2ELi2EE16InternalDataBaseE]+0x20):
undefined reference to `dealii::FiniteElement<2,
2>::InternalDataBase::memory_consumption() const'
collect2: error: ld returned 1 exit status
make[2]: ***
[examples/CMakeFiles/step_3_simplex.debug.dir/build.make:110:
bin/step_3_simplex.debug] Error 1
make[1]: *** [CMakeFiles/Makefile2:3814:
examples/CMakeFiles/step_3_simplex.debug.dir/all] Error 2
make: *** [Makefile:136: all] Error 2
MathW15Lnx:/home/jurombo/Downloads/dealii-9.3.0/build #
2. How do I fix this compile error?
-- mathematical sciences harare institute of technology 15015 ganges road p.o box be277 belvedere harare zimbabwe business : +263.24.274.1423-36 facsimile : +263.24.274.1408 mobile zw1: +263.77.283.8167 mobile zw2: +263.77.412.0815 mobile ind: +91.844.867.9322 home : +263.68.215.3910
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Wolfgang Bangerth
Andrew,
> I am running dealii on Docker, and now would like to debug my projects using
> Eclipse.
>
> 1. How do you that so that Eclipse recognise the dealii that is in a container
> and work in sync?
Eclipse in the container as well.
> Why I am not running a compiled dealii is because I am getting//this error
> with log ending:
>
> //usr/lib64/gcc/x86_64-suse-linux/11/../../../../x86_64-suse-linux/bin/ld:
> undefined reference to `dealii::FiniteElement<2,
This looks like a bug to me. Can you try whether this patch help?
https://github.com/dealii/dealii/pull/12793
Best
W.
--
------------------------------------------------------------------------
Wolfgang Bangerth email: bang...@colostate.edu
www: http://www.math.colostate.edu/~bangerth/
jack urombo
Running quicktests...
Test project /home/jurombo/Downloads/dealii/build/tests/quick_tests
Start 1: step.debug
Start 2: step.release
Start 3: affinity.debug
Start 4: tbb.debug
1/10 Test #4: tbb.debug ........................ Passed 22.25 sec
Start 5: taskflow.debug
2/10 Test #3: affinity.debug ................... Passed 22.71 sec
Start 6: lapack.debug
3/10 Test #2: step.release ..................... Passed 24.02 sec
Start 7: umfpack.debug
4/10 Test #1: step.debug ....................... Passed 28.17 sec
Start 8: arpack.debug
5/10 Test #5: taskflow.debug ................... Passed 7.62 sec
Start 9: boost_zlib.debug
6/10 Test #6: lapack.debug ..................... Passed 8.39 sec
Start 10: gmsh.debug
7/10 Test #7: umfpack.debug .................... Passed 14.48 sec
8/10 Test #9: boost_zlib.debug ................. Passed 8.85 sec
9/10 Test #10: gmsh.debug ....................... Passed 9.46 sec
10/10 Test #8: arpack.debug ..................... Passed 13.42 sec
100% tests passed, 0 tests failed out of 10
Total Test time (real) = 41.59 sec
Built target test