Re: [dDocent User Group] dDocent naming convention

[Jon Puritz]

For debugging or troubleshooting, please include the following information:

The last output in dDocent.runs file
The entire dDocent_main.LOG
The output of ls -l in your working directory

On December 21, 2020 at 6:44:39 PM, M. Alicia Pascual R. (m.alicia...@gmail.com) wrote:

Hi,

My original filenames after demultiplexing (without trimming), were: 

1c_244_R1.fastq.gz

1c_244_R2.fastq.gz

But I renamed them to 

PopA_244.F.fq.gz

PopA_244.R.fq.gz I believe this is according to dDocent naming conventions, but it either detects 0 individuals or just tells me they don't follow  naming conventions and to please rename individuals to: Locality_Individual.F.fq.gz, For example: LocA_001.F.fq.gz.

What I am not seeing? this is driving me insane. I had used dDocent before and I don't remember this part being such a pain.

Thanks,

Mariana

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