DCM4CHEE-ARC-LIGHT - how to set folder structure in storage descriptor

Docjay

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Apr 3, 2018, 9:02:03 PM4/3/18

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Is there any way to store studes in the archive in folders that relate to the study date?

example:

c\dicom\studies\2018\01\02 (for a study with a study date of 1/2/2018)

Currently I believe it stores them in folders named for when the study was received?

thanks

gunterze

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Apr 4, 2018, 5:58:30 AM4/4/18

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Replace Storage property
pathFormat={now,date,yyyy/MM/dd}/{0020000D,hash}/{0020000E,hash}/{00080018,hash}
by
pathFormat={00080020,date,yyyy/MM/dd}/{0020000D,hash}/{0020000E,hash}/{00080018,hash}

Docjay

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Apr 5, 2018, 8:52:22 AM4/5/18

to dcm4che

Gunter,

If I wanted to add the pateint ID to it without the hash, how would that look?

I tried what I have below, but it still used a hash of the patient ID.

pathFormat={00080020,date,yyyy/MM/dd}/{00100020}/{0020000D,hash}/{0020000E,hash}/{00080018,hash}

gunterze

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Apr 9, 2018, 7:43:19 AM4/9/18

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Your configuration works for me:
$ dcmdump ~/wildfly-12.0.0.Final/standalone/data/fs1/null/SCSGERM/58BE7E77/9247637B/3A98E43C
0: [0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\0\
132: (0002,0000) UL #4 [174] FileMetaInformationGroupLength
144: (0002,0001) OB #2 [0\1] FileMetaInformationVersion
158: (0002,0002) UI #26 [1.2.840.10008.5.1.4.1.1.7] MediaStorageSOPClassUID
192: (0002,0003) UI #44 [1.3.6.1.4.1.5962.1.1.0.1.1.1175775772.5723.0] MediaSt
244: (0002,0010) UI #20 [1.2.840.10008.1.2.1] TransferSyntaxUID
272: (0002,0012) UI #16 [1.2.40.0.13.1.3] ImplementationClassUID
296: (0002,0013) SH #14 [dcm4che-5.13.1] ImplementationVersionName
318: (0008,0005) CS #10 [ISO_IR 100] SpecificCharacterSet
336: (0008,0012) DA #8 [20070405] InstanceCreationDate
352: (0008,0013) TM #6 [082252] InstanceCreationTime
366: (0008,0014) UI #18 [1.3.6.1.4.1.5962.3] InstanceCreatorUID
392: (0008,0016) UI #26 [1.2.840.10008.5.1.4.1.1.7] SOPClassUID
426: (0008,0018) UI #44 [1.3.6.1.4.1.5962.1.1.0.1.1.1175775772.5723.0] SOPInst
478: (0008,0020) DA #0 [] StudyDate
486: (0008,0030) TM #0 [] StudyTime
494: (0008,0050) SH #0 [] AccessionNumber
502: (0008,0060) CS #2 [OT] Modality
512: (0008,0064) CS #4 [WSD] ConversionType
524: (0008,0070) LO #0 [] Manufacturer
532: (0008,0090) PN #4 [^^^^] ReferringPhysicianName
544: (0008,0201) SH #6 [-0400] TimezoneOffsetFromUTC
558: (0010,0010) PN #14 [Äneas^Rüdiger] PatientName
580: (0010,0020) LO #8 [SCSGERM] PatientID
:

Piero Chiacchiaretta

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Apr 10, 2018, 9:37:13 AM4/10/18

to dcm4che

Hi i reproduced the error but i don’t understand the log error:

2018-04-10 14:49:31,957 INFO [org.dcm4che3.net.Dimse] (EE-ManagedExecutorService-default-Thread-26) DCM4CHEE<-MR_3T(29) >> 557:C-STORE-RQ[pcid=5, prior=0

cuid=1.2.840.10008.5.1.4.1.1.4.1 - Enhanced MR Image Storage

iuid=1.3.46.670589.11.17514.5.20.1.1.5204.2018040917225036647 - ?

tsuid=1.2.840.10008.1.2.1 - Explicit VR Little Endian

2018-04-10 14:59:08,867 WARN [org.dcm4chee.arc.store.impl.StoreServiceImpl] (EE-ManagedExecutorService-default-Thread-26) DCM4CHEE<-MR_3T(29): Failed to parse received object:

: java.io.EOFException

at org.dcm4che3.util.StreamUtils.readFully(StreamUtils.java:74)

at org.dcm4che3.net.PDUDecoder.readFully(PDUDecoder.java:225)

at org.dcm4che3.net.PDUDecoder.readPDU(PDUDecoder.java:220)

at org.dcm4che3.net.PDUDecoder.nextPDU(PDUDecoder.java:176)

at org.dcm4che3.net.PDUDecoder.nextPDV(PDUDecoder.java:510)

at org.dcm4che3.net.PDUDecoder.isLastPDV(PDUDecoder.java:538)

at org.dcm4che3.net.PDUDecoder.read(PDUDecoder.java:561)

at java.io.FilterInputStream.read(FilterInputStream.java:133)

at org.dcm4che3.io.DicomInputStream.read(DicomInputStream.java:367)

at org.dcm4che3.util.StreamUtils.copy(StreamUtils.java:104)

at org.dcm4che3.imageio.codec.Transcoder.copyPixelData(Transcoder.java:418)

at org.dcm4che3.imageio.codec.Transcoder.processPixelData(Transcoder.java:386)

at org.dcm4che3.imageio.codec.Transcoder.access$200(Transcoder.java:72)

at org.dcm4che3.imageio.codec.Transcoder$1.readValue(Transcoder.java:337)

at org.dcm4che3.io.DicomInputStream.readAttributes(DicomInputStream.java:533)

at org.dcm4che3.imageio.codec.Transcoder.transcode(Transcoder.java:321)

at org.dcm4chee.arc.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:179)

at org.dcm4chee.arc.store.impl.StoreServiceImpl$Proxy$_$$_WeldClientProxy.store(Unknown Source)

at org.dcm4chee.arc.store.scp.CStoreSCP.store(CStoreSCP.java:36)

at org.dcm4che3.net.service.BasicCStoreSCP.onDimseRQ(BasicCStoreSCP.java:72)

at sun.reflect.GeneratedMethodAccessor95.invoke(Unknown Source)

at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)

at java.lang.reflect.Method.invoke(Method.java:498)

at org.jboss.weld.bean.proxy.AbstractBeanInstance.invoke(AbstractBeanInstance.java:38)

at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)

at org.dcm4che3.net.service.DicomService$1735744439$Proxy$_$$_WeldClientProxy.onDimseRQ(Unknown Source)

at org.dcm4che3.net.service.DicomServiceRegistry.onDimseRQ(DicomServiceRegistry.java:86)

at org.dcm4che3.net.ApplicationEntity.onDimseRQ(ApplicationEntity.java:459)

at org.dcm4che3.net.Association.onDimseRQ(Association.java:696)

at org.dcm4che3.net.PDUDecoder.decodeDIMSE(PDUDecoder.java:459)

at org.dcm4che3.net.Association.handlePDataTF(Association.java:679)

at org.dcm4che3.net.State$4.onPDataTF(State.java:103)

at org.dcm4che3.net.Association.onPDataTF(Association.java:675)

at org.dcm4che3.net.PDUDecoder.nextPDU(PDUDecoder.java:177)

at org.dcm4che3.net.Association$2.run(Association.java:518)

at org.jboss.as.ee.concurrent.ControlPointUtils$ControlledRunnable.run(ControlPointUtils.java:105)

at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)

at java.util.concurrent.FutureTask.run(FutureTask.java:266)

at org.glassfish.enterprise.concurrent.internal.ManagedFutureTask.run(ManagedFutureTask.java:141)

at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)

at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)

at java.lang.Thread.run(Thread.java:748)

at org.glassfish.enterprise.concurrent.ManagedThreadFactoryImpl$ManagedThread.run(ManagedThreadFactoryImpl.java:250)

at org.jboss.as.ee.concurrent.service.ElytronManagedThreadFactory$ElytronManagedThread.run(ElytronManagedThreadFactory.java:78)

2018-04-10 14:59:08,901 INFO [org.dcm4che3.net.Association] (EE-ManagedExecutorService-default-Thread-26) DCM4CHEE<-MR_3T(29): processing 557:C-STORE-RQ[pcid=5, prior=0

cuid=1.2.840.10008.5.1.4.1.1.4.1 - Enhanced MR Image Storage

iuid=1.3.46.670589.11.17514.5.20.1.1.5204.2018040917225036647 - ?

tsuid=1.2.840.10008.1.2.1 - Explicit VR Little Endian failed. Caused by: : org.dcm4che3.net.service.DicomServiceException: java.io.EOFException

at org.dcm4chee.arc.store.impl.StoreServiceImpl.store(StoreServiceImpl.java:186)