Dataverse 6.3 error in facets
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Alfredo Cosco
Sep 26, 2024, 1:23:19 PM9/26/24
to Dataverse Users Community
Hello,
most of the toruble in the upgrade are solver, still remain a problem with facets.
If I click on a facet link:
http://mydataverse/root?q=&fq1=dvCategory%3A"Researcher"&fq0=dvObjectType%3A(dataverses+OR+datasets)&types=dataverses%3Adatasets&sort=dateSort&order=
http://mydataverse/root?q=&fq1=dvCategory%3A"Researcher"&fq0=dvObjectType%3A(dataverses+OR+datasets)&types=dataverses%3Adatasets&sort=dateSort&order=
I have this error:
[[2024-09-26T17:19:14.635+0000] [Payara 6.2024.9] [WARNING] [faces.metadata.invalid.location] [jakarta.enterprise.resource.webcontainer.faces.taglib] [tid: _ThreadID=87 _ThreadName=http-thread-pool::jk-connector(2)] [timeMillis: 1727371154635] [levelValue: 900] [[
JSF1103: The metadata facet must be a direct child of the view in viewId /dataset.xhtml]]
[2024-09-26T17:19:14.676+0000] [Payara 6.2024.9] [WARNING] [faces.metadata.invalid.location] [jakarta.enterprise.resource.webcontainer.faces.taglib] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371154676] [levelValue: 900] [[
JSF1103: The metadata facet must be a direct child of the view in viewId /dataverse.xhtml]]
[2024-09-26T17:19:15.265+0000] [Payara 6.2024.9] [WARNING] [AS-EJB-00056] [jakarta.enterprise.ejb.container] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371155265] [levelValue: 900] [[
A system exception occurred during an invocation on EJB DatasetFieldServiceBean, method: public java.lang.String edu.harvard.iq.dataverse.DatasetFieldServiceBean.getFieldLanguage(java.lang.String,java.lang.String)]]
[2024-09-26T17:19:15.268+0000] [Payara 6.2024.9] [WARNING] [] [jakarta.enterprise.ejb.container] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371155268] [levelValue: 900] [[
jakarta.ejb.EJBException: Cannot invoke "String.split(String)" because "languages" is null
at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:723)
at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:652)
at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:482)
at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4601)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2134)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2104)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:90)
at jdk.proxy75/jdk.proxy75.$Proxy420.getFieldLanguage(Unknown Source)
at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetFieldServiceBean__Intf____Bean__.getFieldLanguage(Unknown Source)
at edu.harvard.iq.dataverse.DatasetPage.getFieldLanguage(DatasetPage.java:6162)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at jakarta.el.ELUtil.invokeMethod(ELUtil.java:215)
at jakarta.el.BeanELResolver.invoke(BeanELResolver.java:487)
at jakarta.el.CompositeELResolver.invoke(CompositeELResolver.java:198)
at org.glassfish.expressly.parser.AstValue.getValue(AstValue.java:298)
at org.glassfish.expressly.parser.AstValue.getValue(AstValue.java:144)
at org.glassfish.expressly.ValueExpressionImpl.getValue(ValueExpressionImpl.java:138)
at org.jboss.weld.module.web.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:73)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.getAttributeValue(HtmlResponseWriter.java:1137)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.flushAttributes(HtmlResponseWriter.java:1097)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.closeStartIfNecessary(HtmlResponseWriter.java:1042)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.writeText(HtmlResponseWriter.java:877)
at jakarta.faces.context.ResponseWriter.writeText(ResponseWriter.java:296)
at com.sun.faces.renderkit.html_basic.TextRenderer.getEndTextToRender(TextRenderer.java:158)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeEnd(HtmlBasicRenderer.java:139)
at jakarta.faces.component.UIComponentBase.encodeEnd(UIComponentBase.java:585)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:265)
at com.sun.faces.renderkit.html_basic.OutputLinkRenderer.encodeChildren(OutputLinkRenderer.java:87)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1435)
at com.sun.faces.facelets.component.RepeatRenderer.encodeChildren(RepeatRenderer.java:64)
at com.sun.faces.facelets.component.UIRepeat.process(UIRepeat.java:551)
at com.sun.faces.facelets.component.UIRepeat.encodeChildren(UIRepeat.java:1041)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:257)
at com.sun.faces.renderkit.html_basic.PassthroughRenderer.encodeChildren(PassthroughRenderer.java:75)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:257)
at com.sun.faces.renderkit.html_basic.PassthroughRenderer.encodeChildren(PassthroughRenderer.java:75)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1435)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at com.sun.faces.application.view.FaceletViewHandlingStrategy.renderView(FaceletViewHandlingStrategy.java:449)
at com.sun.faces.application.view.MultiViewHandler.renderView(MultiViewHandler.java:160)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at org.omnifaces.viewhandler.OmniViewHandler.renderView(OmniViewHandler.java:151)
at com.sun.faces.lifecycle.RenderResponsePhase.execute(RenderResponsePhase.java:93)
at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:72)
at com.sun.faces.lifecycle.LifecycleImpl.render(LifecycleImpl.java:150)
at jakarta.faces.webapp.FacesServlet.executeLifecyle(FacesServlet.java:692)
at jakarta.faces.webapp.FacesServlet.service(FacesServlet.java:449)
at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1554)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:331)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.apache.catalina.core.ApplicationDispatcher.doInvoke(ApplicationDispatcher.java:816)
at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:683)
at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:527)
at org.apache.catalina.core.ApplicationDispatcher.doDispatch(ApplicationDispatcher.java:497)
at org.apache.catalina.core.ApplicationDispatcher.dispatch(ApplicationDispatcher.java:379)
at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:329)
at org.ocpsoft.rewrite.servlet.impl.HttpRewriteResultHandler.handleResult(HttpRewriteResultHandler.java:42)
at org.ocpsoft.rewrite.servlet.RewriteFilter.rewrite(RewriteFilter.java:297)
at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:198)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:257)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:166)
at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:757)
at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:577)
at com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:99)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:158)
at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:372)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:239)
at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:520)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:217)
at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:174)
at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:153)
at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:196)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:88)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:246)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:178)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:118)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:96)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:51)
at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:510)
at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:82)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:83)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:101)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:535)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:515)
at java.base/java.lang.Thread.run(Thread.java:840)
Caused by: java.lang.NullPointerException: Cannot invoke "String.split(String)" because "languages" is null
at edu.harvard.iq.dataverse.DatasetFieldServiceBean.getFieldLanguage(DatasetFieldServiceBean.java:844)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588)
at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408)
at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835)
at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:654)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:604)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
at jdk.internal.reflect.GeneratedMethodAccessor278.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:604)
at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:72)
at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52)
at jdk.internal.reflect.GeneratedMethodAccessor229.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833)
at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375)
at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
... 96 more
]]
JSF1103: The metadata facet must be a direct child of the view in viewId /dataset.xhtml]]
[2024-09-26T17:19:14.676+0000] [Payara 6.2024.9] [WARNING] [faces.metadata.invalid.location] [jakarta.enterprise.resource.webcontainer.faces.taglib] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371154676] [levelValue: 900] [[
JSF1103: The metadata facet must be a direct child of the view in viewId /dataverse.xhtml]]
[2024-09-26T17:19:15.265+0000] [Payara 6.2024.9] [WARNING] [AS-EJB-00056] [jakarta.enterprise.ejb.container] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371155265] [levelValue: 900] [[
A system exception occurred during an invocation on EJB DatasetFieldServiceBean, method: public java.lang.String edu.harvard.iq.dataverse.DatasetFieldServiceBean.getFieldLanguage(java.lang.String,java.lang.String)]]
[2024-09-26T17:19:15.268+0000] [Payara 6.2024.9] [WARNING] [] [jakarta.enterprise.ejb.container] [tid: _ThreadID=88 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1727371155268] [levelValue: 900] [[
jakarta.ejb.EJBException: Cannot invoke "String.split(String)" because "languages" is null
at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:723)
at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:652)
at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:482)
at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4601)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2134)
at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2104)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:90)
at jdk.proxy75/jdk.proxy75.$Proxy420.getFieldLanguage(Unknown Source)
at edu.harvard.iq.dataverse.__EJB31_Generated__DatasetFieldServiceBean__Intf____Bean__.getFieldLanguage(Unknown Source)
at edu.harvard.iq.dataverse.DatasetPage.getFieldLanguage(DatasetPage.java:6162)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at jakarta.el.ELUtil.invokeMethod(ELUtil.java:215)
at jakarta.el.BeanELResolver.invoke(BeanELResolver.java:487)
at jakarta.el.CompositeELResolver.invoke(CompositeELResolver.java:198)
at org.glassfish.expressly.parser.AstValue.getValue(AstValue.java:298)
at org.glassfish.expressly.parser.AstValue.getValue(AstValue.java:144)
at org.glassfish.expressly.ValueExpressionImpl.getValue(ValueExpressionImpl.java:138)
at org.jboss.weld.module.web.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:73)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.getAttributeValue(HtmlResponseWriter.java:1137)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.flushAttributes(HtmlResponseWriter.java:1097)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.closeStartIfNecessary(HtmlResponseWriter.java:1042)
at com.sun.faces.renderkit.html_basic.HtmlResponseWriter.writeText(HtmlResponseWriter.java:877)
at jakarta.faces.context.ResponseWriter.writeText(ResponseWriter.java:296)
at com.sun.faces.renderkit.html_basic.TextRenderer.getEndTextToRender(TextRenderer.java:158)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeEnd(HtmlBasicRenderer.java:139)
at jakarta.faces.component.UIComponentBase.encodeEnd(UIComponentBase.java:585)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:265)
at com.sun.faces.renderkit.html_basic.OutputLinkRenderer.encodeChildren(OutputLinkRenderer.java:87)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1435)
at com.sun.faces.facelets.component.RepeatRenderer.encodeChildren(RepeatRenderer.java:64)
at com.sun.faces.facelets.component.UIRepeat.process(UIRepeat.java:551)
at com.sun.faces.facelets.component.UIRepeat.encodeChildren(UIRepeat.java:1041)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:257)
at com.sun.faces.renderkit.html_basic.PassthroughRenderer.encodeChildren(PassthroughRenderer.java:75)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeRecursive(HtmlBasicRenderer.java:257)
at com.sun.faces.renderkit.html_basic.PassthroughRenderer.encodeChildren(PassthroughRenderer.java:75)
at jakarta.faces.component.UIComponentBase.encodeChildren(UIComponentBase.java:556)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1435)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at jakarta.faces.component.UIComponent.encodeAll(UIComponent.java:1438)
at com.sun.faces.application.view.FaceletViewHandlingStrategy.renderView(FaceletViewHandlingStrategy.java:449)
at com.sun.faces.application.view.MultiViewHandler.renderView(MultiViewHandler.java:160)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at jakarta.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:125)
at org.omnifaces.viewhandler.OmniViewHandler.renderView(OmniViewHandler.java:151)
at com.sun.faces.lifecycle.RenderResponsePhase.execute(RenderResponsePhase.java:93)
at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:72)
at com.sun.faces.lifecycle.LifecycleImpl.render(LifecycleImpl.java:150)
at jakarta.faces.webapp.FacesServlet.executeLifecyle(FacesServlet.java:692)
at jakarta.faces.webapp.FacesServlet.service(FacesServlet.java:449)
at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1554)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:331)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.apache.catalina.core.ApplicationDispatcher.doInvoke(ApplicationDispatcher.java:816)
at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:683)
at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:527)
at org.apache.catalina.core.ApplicationDispatcher.doDispatch(ApplicationDispatcher.java:497)
at org.apache.catalina.core.ApplicationDispatcher.dispatch(ApplicationDispatcher.java:379)
at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:329)
at org.ocpsoft.rewrite.servlet.impl.HttpRewriteResultHandler.handleResult(HttpRewriteResultHandler.java:42)
at org.ocpsoft.rewrite.servlet.RewriteFilter.rewrite(RewriteFilter.java:297)
at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:198)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:257)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:166)
at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:757)
at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:577)
at com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:99)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:158)
at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:372)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:239)
at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:520)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:217)
at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:174)
at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:153)
at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:196)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:88)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:246)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:178)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:118)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:96)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:51)
at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:510)
at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:82)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:83)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:101)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:535)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:515)
at java.base/java.lang.Thread.run(Thread.java:840)
Caused by: java.lang.NullPointerException: Cannot invoke "String.split(String)" because "languages" is null
at edu.harvard.iq.dataverse.DatasetFieldServiceBean.getFieldLanguage(DatasetFieldServiceBean.java:844)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:588)
at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:408)
at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4835)
at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:654)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:834)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:604)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
at jdk.internal.reflect.GeneratedMethodAccessor278.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833)
at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:604)
at org.jboss.weld.module.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:72)
at org.jboss.weld.module.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52)
at jdk.internal.reflect.GeneratedMethodAccessor229.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:569)
at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:888)
at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:833)
at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:375)
at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4807)
at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4795)
at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
... 96 more
]]
James Myers
Sep 27, 2024, 12:18:48 PM9/27/24
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My guess is you are using an external vocabulary configuration (:CVocConf setting) that doesn’t have the required “languages” entry. You can have “languages”:”” in your configuration but it has to be there – see https://github.com/gdcc/dataverse-external-vocab-support/blob/23f1ee42980d03b63ffe8cf6141e699b59009f44/examples/config/grantNumberAgencyRor.json#L11 for an example.
-- Jim
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Alfredo Cosco
Sep 28, 2024, 1:21:38 PM9/28/24
to dataverse...@googlegroups.com
Thank you, Jim. I tried checking your latest suggestion, but at some point last night, it seemed like every fix was leading to new issues. So, I decided to take a different approach and redid the entire update process. It’s now successfully completed.
Thanks again for your help,
Thanks again for your help,
Alfredo
To view this discussion on the web visit https://groups.google.com/d/msgid/dataverse-community/IA2P220MB19868134B5E42A8041594E04BF6B2%40IA2P220MB1986.NAMP220.PROD.OUTLOOK.COM.
Paul Boon
Sep 30, 2024, 4:55:25 AM9/30/24
to dataverse...@googlegroups.com
Hi all,
FYI Dataverse 6.2 and 6.3 work with payara 6.2024.6 but not with the latest payara 6.2024.9!
While testing our upgrade to Dataverse 6.3 I tried payara 6.2024.9 because it was newer and should have some fixes, however I did not get it to work with Dataverse. The home page showed a (red) 500 error block, but strangely 'My Data' did work.
Fragment from the log:
[#|2024-09-26T14:46:42.579+0200|WARNING|Payara 6.2024.9|jakarta.enterprise.web|_ThreadID=101;_ThreadName=http-thread-pool::jk-connector(4);_TimeMillis=1727354802579;_LevelValue=900;|
StandardWrapperValve[default]: Servlet.service() for servlet default threw exception
java.lang.NullPointerException: Cannot invoke "String.split(String)" because "languages" is null
at edu.harvard.iq.dataverse.DatasetFieldServiceBean.getFieldLanguage(DatasetFieldServiceBean.java:844)
I did not investigate it further, because it all seems to work ok with the version mentioned in the release notes; 6.2024.6
From: dataverse...@googlegroups.com <dataverse...@googlegroups.com> on behalf of Alfredo Cosco <alfred...@gmail.com>
Sent: Saturday, September 28, 2024 7:21 PM
To: dataverse...@googlegroups.com <dataverse...@googlegroups.com>
Subject: Re: [Dataverse-Users] Dataverse 6.3 error in facets
Sent: Saturday, September 28, 2024 7:21 PM
To: dataverse...@googlegroups.com <dataverse...@googlegroups.com>
Subject: Re: [Dataverse-Users] Dataverse 6.3 error in facets
To view this discussion on the web visit
https://groups.google.com/d/msgid/dataverse-community/CAB8fwFPoeeAa_5QJqyDSNp5SuewF%3Dn8CmycsnW_5vqvL_cvBtQ%40mail.gmail.com.
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