Sherry,
I don’t understand why it failed yet, but from the logs I expect the files did make it to s3. They should be in the bucket, in a dir corresponding to the dataset PID, using the storageidentifier numbers in the logs. You should be able to add them to the dataset using the direct upload api - https://guides.dataverse.org/en/latest/developers/s3-direct-upload-api.html#adding-the-uploaded-file-to-the-dataset. That’s essentially what the DVUploader does, so it is not clear to me why it failed, but using the API directly might give your more details about what went wrong or let you try variations on the jsonData to send.
-- Jim
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... it often means that values were saved in the database and then later the rules were made more restrictive.
But thanks to your advice, I was able to use the "add file" command to get the missing files to show up in the dataset. They were already in the correct S3 bucket.