Fresh dataverse install displays blank page

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Jose Galeano

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Jun 19, 2018, 12:18:38 PM6/19/18
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I just did a fresh intall of dataverse and its prerequisites and when I launch de app it display a blank page, my server.log file has the following content:
[2018-06-19T12:15:35.191-0400] [glassfish 4.1] [WARNING] [AS-EJB-00056] [javax.enterprise.ejb.container] [tid: _ThreadID=29 _ThreadName=http-listener-1(2)] [timeMillis: 1529424935191] [levelValue: 900] [[
A system exception occurred during an invocation on EJB DataverseServiceBean, method: public edu.harvard.iq.dataverse.Dataverse edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse()]]

[2018-06-19T12:15:35.191-0400] [glassfish 4.1] [WARNING] [] [javax.enterprise.ejb.container] [tid: _ThreadID=29 _ThreadName=http-listener-1(2)] [timeMillis: 1529424935191] [levelValue: 900] [[
javax.ejb.EJBException
    at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:748)
    at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:698)
    at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:503)
    at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566)
    at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074)
    at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88)
    at com.sun.proxy.$Proxy551.findRootDataverse(Unknown Source)
    at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.jboss.weld.util.reflection.Reflections.invokeAndUnwrap(Reflections.java:434)
    at org.jboss.weld.bean.proxy.EnterpriseBeanProxyMethodHandler.invoke(EnterpriseBeanProxyMethodHandler.java:127)
    at org.jboss.weld.bean.proxy.EnterpriseTargetBeanInstance.invoke(EnterpriseTargetBeanInstance.java:56)
    at org.jboss.weld.bean.proxy.InjectionPointPropagatingEnterpriseTargetBeanInstance.invoke(InjectionPointPropagatingEnterpriseTargetBeanInstance.java:67)
    at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
    at edu.harvard.iq.dataverse.DataverseServiceBean$Proxy$_$$_Weld$EnterpriseProxy$.findRootDataverse(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at javax.el.ELUtil.invokeMethod(ELUtil.java:332)
    at javax.el.BeanELResolver.invoke(BeanELResolver.java:537)
    at javax.el.CompositeELResolver.invoke(CompositeELResolver.java:256)
    at com.sun.el.parser.AstValue.getValue(AstValue.java:136)
    at com.sun.el.parser.AstValue.getValue(AstValue.java:204)
    at com.sun.el.parser.AstDeferredExpression.getValue(AstDeferredExpression.java:63)
    at com.sun.el.parser.AstCompositeExpression.getValue(AstCompositeExpression.java:68)
    at com.sun.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:226)
    at org.jboss.weld.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:109)
    at com.sun.el.parser.AstIdentifier.getValue(AstIdentifier.java:112)
    at com.sun.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:226)
    at org.jboss.weld.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:109)
    at javax.faces.component.ComponentStateHelper.eval(ComponentStateHelper.java:194)
    at javax.faces.component.ComponentStateHelper.eval(ComponentStateHelper.java:182)
    at javax.faces.component.UIOutput.getValue(UIOutput.java:174)
    at com.sun.faces.renderkit.html_basic.HtmlBasicInputRenderer.getValue(HtmlBasicInputRenderer.java:205)
    at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.getCurrentValue(HtmlBasicRenderer.java:355)
    at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeEnd(HtmlBasicRenderer.java:164)
    at javax.faces.component.UIComponentBase.encodeEnd(UIComponentBase.java:919)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1863)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1859)
    at org.primefaces.renderkit.HeadRenderer.encodeBegin(HeadRenderer.java:57)
    at javax.faces.component.UIComponentBase.encodeBegin(UIComponentBase.java:864)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1854)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1859)
    at com.sun.faces.application.view.FaceletViewHandlingStrategy.renderView(FaceletViewHandlingStrategy.java:456)
    at com.sun.faces.application.view.MultiViewHandler.renderView(MultiViewHandler.java:133)
    at javax.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:337)
    at org.ocpsoft.rewrite.faces.RewriteViewHandler.renderView(RewriteViewHandler.java:196)
    at javax.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:337)
    at com.sun.faces.lifecycle.RenderResponsePhase.execute(RenderResponsePhase.java:120)
    at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:101)
    at com.sun.faces.lifecycle.LifecycleImpl.render(LifecycleImpl.java:219)
    at javax.faces.webapp.FacesServlet.service(FacesServlet.java:647)
    at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1682)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:344)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
    at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
    at org.apache.catalina.core.ApplicationDispatcher.doInvoke(ApplicationDispatcher.java:873)
    at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:739)
    at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:695)
    at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:626)
    at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:500)
    at org.apache.catalina.core.StandardHostValve.dispatchToErrorPage(StandardHostValve.java:699)
    at org.apache.catalina.core.StandardHostValve.status(StandardHostValve.java:380)
    at org.apache.catalina.core.StandardHostValve.postInvoke(StandardHostValve.java:234)
    at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:417)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:282)
    at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:459)
    at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:167)
    at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:201)
    at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:175)
    at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
    at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
    at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
    at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:561)
    at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:565)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:545)
    at java.lang.Thread.run(Thread.java:748)
Caused by: javax.persistence.NoResultException: getSingleResult() did not retrieve any entities.
    at org.eclipse.persistence.internal.jpa.QueryImpl.throwNoResultException(QueryImpl.java:972)
    at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:522)
    at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400)
    at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:146)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081)
    at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153)
    at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786)
    at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608)
    at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64)
    at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52)
    at sun.reflect.GeneratedMethodAccessor361.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608)
    at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
    at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
    at sun.reflect.GeneratedMethodAccessor366.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369)
    at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758)
    at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
    ... 88 more
]]

[2018-06-19T12:15:35.192-0400] [glassfish 4.1] [SEVERE] [] [javax.enterprise.resource.webcontainer.jsf.application] [tid: _ThreadID=29 _ThreadName=http-listener-1(2)] [timeMillis: 1529424935192] [levelValue: 1000] [[
Error Rendering View[/500.xhtml]
javax.el.ELException: /dataverse_template.xhtml @14,56 value="#{pageTitle}": /500.xhtml @13,134 value="#{bundle['error.500.page.title']} - #{dataverseServiceBean.findRootDataverse().name}": javax.ejb.EJBException
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:114)
    at javax.faces.component.ComponentStateHelper.eval(ComponentStateHelper.java:194)
    at javax.faces.component.ComponentStateHelper.eval(ComponentStateHelper.java:182)
    at javax.faces.component.UIOutput.getValue(UIOutput.java:174)
    at com.sun.faces.renderkit.html_basic.HtmlBasicInputRenderer.getValue(HtmlBasicInputRenderer.java:205)
    at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.getCurrentValue(HtmlBasicRenderer.java:355)
    at com.sun.faces.renderkit.html_basic.HtmlBasicRenderer.encodeEnd(HtmlBasicRenderer.java:164)
    at javax.faces.component.UIComponentBase.encodeEnd(UIComponentBase.java:919)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1863)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1859)
    at org.primefaces.renderkit.HeadRenderer.encodeBegin(HeadRenderer.java:57)
    at javax.faces.component.UIComponentBase.encodeBegin(UIComponentBase.java:864)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1854)
    at javax.faces.component.UIComponent.encodeAll(UIComponent.java:1859)
    at com.sun.faces.application.view.FaceletViewHandlingStrategy.renderView(FaceletViewHandlingStrategy.java:456)
    at com.sun.faces.application.view.MultiViewHandler.renderView(MultiViewHandler.java:133)
    at javax.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:337)
    at org.ocpsoft.rewrite.faces.RewriteViewHandler.renderView(RewriteViewHandler.java:196)
    at javax.faces.application.ViewHandlerWrapper.renderView(ViewHandlerWrapper.java:337)
    at com.sun.faces.lifecycle.RenderResponsePhase.execute(RenderResponsePhase.java:120)
    at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:101)
    at com.sun.faces.lifecycle.LifecycleImpl.render(LifecycleImpl.java:219)
    at javax.faces.webapp.FacesServlet.service(FacesServlet.java:647)
    at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1682)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:344)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
    at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:256)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:214)
    at org.apache.catalina.core.ApplicationDispatcher.doInvoke(ApplicationDispatcher.java:873)
    at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:739)
    at org.apache.catalina.core.ApplicationDispatcher.doInclude(ApplicationDispatcher.java:695)
    at org.apache.catalina.core.ApplicationDispatcher.include(ApplicationDispatcher.java:626)
    at org.apache.catalina.core.StandardHostValve.custom(StandardHostValve.java:500)
    at org.apache.catalina.core.StandardHostValve.dispatchToErrorPage(StandardHostValve.java:699)
    at org.apache.catalina.core.StandardHostValve.status(StandardHostValve.java:380)
    at org.apache.catalina.core.StandardHostValve.postInvoke(StandardHostValve.java:234)
    at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:417)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:282)
    at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:459)
    at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:167)
    at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:201)
    at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:175)
    at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
    at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
    at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
    at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
    at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:561)
    at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
    at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:565)
    at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:545)
    at java.lang.Thread.run(Thread.java:748)
Caused by: javax.el.ELException: /500.xhtml @13,134 value="#{bundle['error.500.page.title']} - #{dataverseServiceBean.findRootDataverse().name}": javax.ejb.EJBException
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:114)
    at com.sun.el.parser.AstIdentifier.getValue(AstIdentifier.java:112)
    at com.sun.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:226)
    at org.jboss.weld.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:109)
    ... 57 more
Caused by: javax.el.ELException: javax.ejb.EJBException
    at javax.el.ELUtil.invokeMethod(ELUtil.java:336)
    at javax.el.BeanELResolver.invoke(BeanELResolver.java:537)
    at javax.el.CompositeELResolver.invoke(CompositeELResolver.java:256)
    at com.sun.el.parser.AstValue.getValue(AstValue.java:136)
    at com.sun.el.parser.AstValue.getValue(AstValue.java:204)
    at com.sun.el.parser.AstDeferredExpression.getValue(AstDeferredExpression.java:63)
    at com.sun.el.parser.AstCompositeExpression.getValue(AstCompositeExpression.java:68)
    at com.sun.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:226)
    at org.jboss.weld.el.WeldValueExpression.getValue(WeldValueExpression.java:50)
    at com.sun.faces.facelets.el.TagValueExpression.getValue(TagValueExpression.java:109)
    ... 61 more
Caused by: javax.ejb.EJBException
    at com.sun.ejb.containers.EJBContainerTransactionManager.processSystemException(EJBContainerTransactionManager.java:748)
    at com.sun.ejb.containers.EJBContainerTransactionManager.completeNewTx(EJBContainerTransactionManager.java:698)
    at com.sun.ejb.containers.EJBContainerTransactionManager.postInvokeTx(EJBContainerTransactionManager.java:503)
    at com.sun.ejb.containers.BaseContainer.postInvokeTx(BaseContainer.java:4566)
    at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2074)
    at com.sun.ejb.containers.BaseContainer.postInvoke(BaseContainer.java:2044)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:220)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandlerDelegate.invoke(EJBLocalObjectInvocationHandlerDelegate.java:88)
    at com.sun.proxy.$Proxy551.findRootDataverse(Unknown Source)
    at edu.harvard.iq.dataverse.__EJB31_Generated__DataverseServiceBean__Intf____Bean__.findRootDataverse(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.jboss.weld.util.reflection.Reflections.invokeAndUnwrap(Reflections.java:434)
    at org.jboss.weld.bean.proxy.EnterpriseBeanProxyMethodHandler.invoke(EnterpriseBeanProxyMethodHandler.java:127)
    at org.jboss.weld.bean.proxy.EnterpriseTargetBeanInstance.invoke(EnterpriseTargetBeanInstance.java:56)
    at org.jboss.weld.bean.proxy.InjectionPointPropagatingEnterpriseTargetBeanInstance.invoke(InjectionPointPropagatingEnterpriseTargetBeanInstance.java:67)
    at org.jboss.weld.bean.proxy.ProxyMethodHandler.invoke(ProxyMethodHandler.java:100)
    at edu.harvard.iq.dataverse.DataverseServiceBean$Proxy$_$$_Weld$EnterpriseProxy$.findRootDataverse(Unknown Source)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at javax.el.ELUtil.invokeMethod(ELUtil.java:332)
    ... 70 more
Caused by: javax.persistence.NoResultException: getSingleResult() did not retrieve any entities.
    at org.eclipse.persistence.internal.jpa.QueryImpl.throwNoResultException(QueryImpl.java:972)
    at org.eclipse.persistence.internal.jpa.QueryImpl.getSingleResult(QueryImpl.java:522)
    at org.eclipse.persistence.internal.jpa.EJBQueryImpl.getSingleResult(EJBQueryImpl.java:400)
    at edu.harvard.iq.dataverse.DataverseServiceBean.findRootDataverse(DataverseServiceBean.java:146)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.glassfish.ejb.security.application.EJBSecurityManager.runMethod(EJBSecurityManager.java:1081)
    at org.glassfish.ejb.security.application.EJBSecurityManager.invoke(EJBSecurityManager.java:1153)
    at com.sun.ejb.containers.BaseContainer.invokeBeanMethod(BaseContainer.java:4786)
    at com.sun.ejb.EjbInvocation.invokeBeanMethod(EjbInvocation.java:656)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608)
    at org.jboss.weld.ejb.AbstractEJBRequestScopeActivationInterceptor.aroundInvoke(AbstractEJBRequestScopeActivationInterceptor.java:64)
    at org.jboss.weld.ejb.SessionBeanInterceptor.aroundInvoke(SessionBeanInterceptor.java:52)
    at sun.reflect.GeneratedMethodAccessor361.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.EjbInvocation.proceed(EjbInvocation.java:608)
    at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.doCall(SystemInterceptorProxy.java:163)
    at com.sun.ejb.containers.interceptors.SystemInterceptorProxy.aroundInvoke(SystemInterceptorProxy.java:140)
    at sun.reflect.GeneratedMethodAccessor366.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at com.sun.ejb.containers.interceptors.AroundInvokeInterceptor.intercept(InterceptorManager.java:883)
    at com.sun.ejb.containers.interceptors.AroundInvokeChainImpl.invokeNext(InterceptorManager.java:822)
    at com.sun.ejb.containers.interceptors.InterceptorManager.intercept(InterceptorManager.java:369)
    at com.sun.ejb.containers.BaseContainer.__intercept(BaseContainer.java:4758)
    at com.sun.ejb.containers.BaseContainer.intercept(BaseContainer.java:4746)
    at com.sun.ejb.containers.EJBLocalObjectInvocationHandler.invoke(EJBLocalObjectInvocationHandler.java:212)
    ... 88 more
]]

Philip Durbin

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Jun 19, 2018, 12:40:51 PM6/19/18
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Hi Jose,

I'm sorry to hear you're having trouble installing Dataverse. We're tracking this bug at https://github.com/IQSS/dataverse/issues/3148 but the short version is that the war file has been deployed but the root dataverse hasn't been created.

Which version of Dataverse are you attempting to install? I don't believe we've updated the "latest" link yet but Dataverse 4.9 is out: http://guides.dataverse.org/en/4.9/installation

I'm just thinking that you might need to try again anyway and might want to try the latest version.

The installation process creates a file at scripts/api/setup-all.sh1234. It would help us understand what went wrong if you email this file to sup...@dataverse.org

I'm going to grab some lunch pretty soon but if you want to try some real time troubleshooting sometime, you could join us in http://chat.dataverse.org

Thanks for your interest in Dataverse!

Phil


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Jose Galeano

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Jun 21, 2018, 8:56:04 AM6/21/18
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Hi Philip,

Thank you for your response. I am using CentOS7 and preformed the installation with the dvinstall package with the latests dataverse version (4.9). I am installing dataverse on a VirtualMachine, I don't know if that may be of any use.

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Jose Galeano

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Jun 21, 2018, 9:23:14 AM6/21/18
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Auto Generated Inline Image 1

Philip Durbin

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Jun 21, 2018, 9:55:38 AM6/21/18
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That's for the reply and the screenshot. Dataverse 4.9 on CentOS7 should work just fine. From the screenshot I can tell that the war file is deployed and you should see a version number if you run this command: curl http://localhost:8080/api/info/version

Again, the problem is that the root dataverse hasn't been created.

Did you find a file called something like scripts/api/setup-all.sh1234 and did you email it so sup...@dataverse.org? Another thought is to attempt to reinstall using these steps: http://guides.dataverse.org/en/4.9/installation/installation-main.html#fresh-reinstall

Thanks,

Phil


On Thu, Jun 21, 2018 at 9:23 AM, Jose Galeano <antoni...@gmail.com> wrote:

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Jose Galeano

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Jun 21, 2018, 12:10:06 PM6/21/18
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I don't have that file, did a complete search and didn't get a result. I have also attempted the fresh installation process but when I proceed to clear solr I get this output:
<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=ISO-8859-1"/>
<title>Error 500 {msg=SolrCore 'collection1' is not available due to init failure: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml,trace=org.apache.solr.common.SolrException: SolrCore 'collection1' is not available due to init failure: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml
    at org.apache.solr.core.CoreContainer.getCore(CoreContainer.java:818)
    at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:289)
    at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:197)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1419)
    at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:455)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:137)
    at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:557)
    at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:231)
    at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1075)
    at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:384)
    at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:193)
    at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1009)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:135)
    at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:255)
    at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:154)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:116)
    at org.eclipse.jetty.server.Server.handle(Server.java:368)
    at org.eclipse.jetty.server.AbstractHttpConnection.handleRequest(AbstractHttpConnection.java:489)
    at org.eclipse.jetty.server.BlockingHttpConnection.handleRequest(BlockingHttpConnection.java:53)
    at org.eclipse.jetty.server.AbstractHttpConnection.content(AbstractHttpConnection.java:953)
    at org.eclipse.jetty.server.AbstractHttpConnection$RequestHandler.content(AbstractHttpConnection.java:1014)
    at org.eclipse.jetty.http.HttpParser.parseNext(HttpParser.java:861)
    at org.eclipse.jetty.http.HttpParser.parseAvailable(HttpParser.java:240)
    at org.eclipse.jetty.server.BlockingHttpConnection.handle(BlockingHttpConnection.java:72)
    at org.eclipse.jetty.server.bio.SocketConnector$ConnectorEndPoint.run(SocketConnector.java:264)
    at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:608)
    at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:543)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.solr.common.SolrException: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml
    at org.apache.solr.schema.IndexSchema.readSchema(IndexSchema.java:612)
    at org.apache.solr.schema.IndexSchema.&lt;init&gt;(IndexSchema.java:166)
    at org.apache.solr.schema.IndexSchemaFactory.create(IndexSchemaFactory.java:55)
    at org.apache.solr.schema.IndexSchemaFactory.buildIndexSchema(IndexSchemaFactory.java:69)
    at org.apache.solr.core.CoreContainer.createFromLocal(CoreContainer.java:554)
    at org.apache.solr.core.CoreContainer.create(CoreContainer.java:592)
    at org.apache.solr.core.CoreContainer$1.call(CoreContainer.java:271)
    at org.apache.solr.core.CoreContainer$1.call(CoreContainer.java:263)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    ... 1 more
Caused by: java.lang.RuntimeException: unknown field 'id'
    at org.apache.solr.schema.IndexSchema.getIndexedField(IndexSchema.java:340)
    at org.apache.solr.schema.IndexSchema.readSchema(IndexSchema.java:530)
    ... 13 more
,code=500}
</title>
</head>
<body><h2>HTTP ERROR 500</h2>
<p>Problem accessing /solr/collection1/update/json. Reason:
<pre>    {msg=SolrCore 'collection1' is not available due to init failure: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml,trace=org.apache.solr.common.SolrException: SolrCore 'collection1' is not available due to init failure: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml
    at org.apache.solr.core.CoreContainer.getCore(CoreContainer.java:818)
    at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:289)
    at org.apache.solr.servlet.SolrDispatchFilter.doFilter(SolrDispatchFilter.java:197)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1419)
    at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:455)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:137)
    at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:557)
    at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:231)
    at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1075)
    at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:384)
    at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:193)
    at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1009)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:135)
    at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:255)
    at org.eclipse.jetty.server.handler.HandlerCollection.handle(HandlerCollection.java:154)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:116)
    at org.eclipse.jetty.server.Server.handle(Server.java:368)
    at org.eclipse.jetty.server.AbstractHttpConnection.handleRequest(AbstractHttpConnection.java:489)
    at org.eclipse.jetty.server.BlockingHttpConnection.handleRequest(BlockingHttpConnection.java:53)
    at org.eclipse.jetty.server.AbstractHttpConnection.content(AbstractHttpConnection.java:953)
    at org.eclipse.jetty.server.AbstractHttpConnection$RequestHandler.content(AbstractHttpConnection.java:1014)
    at org.eclipse.jetty.http.HttpParser.parseNext(HttpParser.java:861)
    at org.eclipse.jetty.http.HttpParser.parseAvailable(HttpParser.java:240)
    at org.eclipse.jetty.server.BlockingHttpConnection.handle(BlockingHttpConnection.java:72)
    at org.eclipse.jetty.server.bio.SocketConnector$ConnectorEndPoint.run(SocketConnector.java:264)
    at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:608)
    at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:543)
    at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.solr.common.SolrException: Schema Parsing Failed: unknown field 'id'. Schema file is /usr/local/solr-4.6.0/example/solr/collection1/schema.xml
    at org.apache.solr.schema.IndexSchema.readSchema(IndexSchema.java:612)
    at org.apache.solr.schema.IndexSchema.&lt;init&gt;(IndexSchema.java:166)
    at org.apache.solr.schema.IndexSchemaFactory.create(IndexSchemaFactory.java:55)
    at org.apache.solr.schema.IndexSchemaFactory.buildIndexSchema(IndexSchemaFactory.java:69)
    at org.apache.solr.core.CoreContainer.createFromLocal(CoreContainer.java:554)
    at org.apache.solr.core.CoreContainer.create(CoreContainer.java:592)
    at org.apache.solr.core.CoreContainer$1.call(CoreContainer.java:271)
    at org.apache.solr.core.CoreContainer$1.call(CoreContainer.java:263)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    ... 1 more
Caused by: java.lang.RuntimeException: unknown field 'id'
    at org.apache.solr.schema.IndexSchema.getIndexedField(IndexSchema.java:340)
    at org.apache.solr.schema.IndexSchema.readSchema(IndexSchema.java:530)
    ... 13 more
,code=500}
</pre></p><hr /><i><small>Powered by Jetty://</small></i><br/>
</body>
</html>



El jueves, 21 de junio de 2018, 8:55:38 (UTC-5), Philip Durbin escribió:
That's for the reply and the screenshot. Dataverse 4.9 on CentOS7 should work just fine. From the screenshot I can tell that the war file is deployed and you should see a version number if you run this command: curl http://localhost:8080/api/info/version

Again, the problem is that the root dataverse hasn't been created.

Did you find a file called something like scripts/api/setup-all.sh1234 and did you email it so sup...@dataverse.org? Another thought is to attempt to reinstall using these steps: http://guides.dataverse.org/en/4.9/installation/installation-main.html#fresh-reinstall

Thanks,

Phil

On Thu, Jun 21, 2018 at 9:23 AM, Jose Galeano <antoni...@gmail.com> wrote:

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Philip Durbin

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Jun 21, 2018, 12:39:30 PM6/21/18
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I'm confused about why you have Solr 4.6.0 installed because for Datavese 4.9 we require Solr 7.3.0: http://guides.dataverse.org/en/4.9/installation/prerequisites.html#solr

Since you don't need Solr 4.6.0, rather than attempting to clear the data, I would suggest shutting it down. Then you'll need to install Solr 7.3.0 using the instructions above.

The installation process could be easier. I'm sorry you're having trouble with it. Don't give up. :)

Phil


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Jose Galeano

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Jun 22, 2018, 9:43:33 AM6/22/18
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Yes, I haven't seen that but I did a new installation again (making sure I got the correct version of everything) and get the following result doing curl ´http://localhost:8080/dataverse´
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml"><head><title>GlassFish Server Open Source Edition  4.1  - Error report</title><style type="text/css"><!--H1 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:22px;} H2 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:16px;} H3 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:14px;} BODY {font-family:Tahoma,Arial,sans-serif;color:black;background-color:white;} B {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;} P {font-family:Tahoma,Arial,sans-serif;background:white;color:black;font-size:12px;}A {color : black;}HR {color : #525D76;}--></style> </head><body><h1>HTTP Status 500 - Internal Server Error</h1><hr/><p><b>type</b> Status report</p><p><b>message</b>Internal Server Error</p><p><b>description</b>The server encountered an internal error that prevented it from fulfilling this request.</p><hr/><h3>GlassFish Server Open Source Edition  4.1 </h3></body></html>

I am attaching my server.log file.

Thank you for your time and dedication! We really appreciate it!


server.log

Philip Durbin

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Jun 22, 2018, 10:37:21 AM6/22/18
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Thanks. The server.log re-confirms that you're seeing the "NoResultException" that https://github.com/IQSS/dataverse/issues/3148 is about. The root dataverse hasn't been created. The "dataverse" database table is empty, I assume.

It's unfortunate that you don't have a file called something like "setup-all.sh1234" or "setup-all.sh4321". The number will vary as is based on the PID of the process that ran the installer. The next best thing would be the complete output of the installation process. Perhaps in your terminal window you can do a "select all" and put all the output into a file and reply with it here (if there are no secrets in it) or email it to sup...@dataverse.org.

A bunch of us are chatting right now at http://chat.dataverse.org if you want to try to get some real time support. It's up to you.

You *could* try installing with Vagrant if you just want to see the installation process succeed: http://guides.dataverse.org/en/4.9/installation/prep.html#vagrant-for-testing-only

Thanks!

Phil

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Jose Galeano

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Jun 22, 2018, 5:00:14 PM6/22/18
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I can't thank you enough for your support. If you can schedule a time where I can chat with you and do the installation process from scratch and provide you with every output I get it would be great.

El viernes, 22 de junio de 2018, 9:37:21 (UTC-5), Philip Durbin escribió:
Thanks. The server.log re-confirms that you're seeing the "NoResultException" that https://github.com/IQSS/dataverse/issues/3148 is about. The root dataverse hasn't been created. The "dataverse" database table is empty, I assume.

It's unfortunate that you don't have a file called something like "setup-all.sh1234" or "setup-all.sh4321". The number will vary as is based on the PID of the process that ran the installer. The next best thing would be the complete output of the installation process. Perhaps in your terminal window you can do a "select all" and put all the output into a file and reply with it here (if there are no secrets in it) or email it to sup...@dataverse.org.

A bunch of us are chatting right now at http://chat.dataverse.org if you want to try to get some real time support. It's up to you.

You *could* try installing with Vagrant if you just want to see the installation process succeed: http://guides.dataverse.org/en/4.9/installation/prep.html#vagrant-for-testing-only

Thanks!

Phil
On Fri, Jun 22, 2018 at 9:43 AM, Jose Galeano <antoni...@gmail.com> wrote:
Yes, I haven't seen that but I did a new installation again (making sure I got the correct version of everything) and get the following result doing curl ´http://localhost:8080/dataverse´
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"><html xmlns="http://www.w3.org/1999/xhtml"><head><title>GlassFish Server Open Source Edition  4.1  - Error report</title><style type="text/css"><!--H1 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:22px;} H2 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:16px;} H3 {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;font-size:14px;} BODY {font-family:Tahoma,Arial,sans-serif;color:black;background-color:white;} B {font-family:Tahoma,Arial,sans-serif;color:white;background-color:#525D76;} P {font-family:Tahoma,Arial,sans-serif;background:white;color:black;font-size:12px;}A {color : black;}HR {color : #525D76;}--></style> </head><body><h1>HTTP Status 500 - Internal Server Error</h1><hr/><p><b>type</b> Status report</p><p><b>message</b>Internal Server Error</p><p><b>description</b>The server encountered an internal error that prevented it from fulfilling this request.</p><hr/><h3>GlassFish Server Open Source Edition  4.1 </h3></body></html>

I am attaching my server.log file.

Thank you for your time and dedication! We really appreciate it!


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