Population assignment transfer from R (genlight) to Structure?

Andrzej Noyszewski

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May 21, 2019, 10:27:39 AM5/21/19

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Hi. Is there some way to transfer genlight object population assignment to structure file format? Is "addcolums" used for this? If yes, how can I use it?

Also, when I try to indNames = TRUE I'm getting error: "Error in gl2structure(gl, indNames = TRUE, :

Number of individuals does not match between indNames and genmat." I'm not sure what is genmat...

Thank you for help!

Diana Prada

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Feb 4, 2020, 11:45:10 PM2/4/20

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Hey Andrzej,

Did you find a way around this? I also want to add the population assignment to the structure file format but i can't see a straight way of doing it.

Cheers,

Dp

Deane Smith

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Feb 5, 2020, 4:03:47 AM2/5/20

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This code works for me.

Hope it helps.

Deane.

gl2structure_HelpCodeR.R

Diana Prada

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Feb 5, 2020, 10:34:36 PM2/5/20

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Thanks heaps, Deane. Your script worked great :-)

Deane Smith

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Feb 6, 2020, 12:07:24 AM2/6/20

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Glad I can help.

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