DANPOS3 wiq does not work

[libin...@gmail.com]

Hi

I am trying to normalise my replicates with quantile normalisation but the wig.py seems does not work well and I am not expert in bioinformatics so really need your help here

 python /Users/bingnanli/git/DANPOS3/danpos.py wig2wiq  sacCer3.chrom.size.Roman test.wig

command:

python /Users/git/DANPOS3/danpos.py wig2wiq sacCer3.chrom.size.Roman test.wig

converting test.wig ...

parsing from test.wig

I start from position 1

II start from position 1

Traceback (most recent call last):

  File "/Users/bingnanli/git/DANPOS3/danpos.py", line 1374, in <module>

    elif sys.argv[1]=='wig2wiq':wig2wiq()

  File "/Users/bingnanli/git/DANPOS3/wiq.py", line 185, in wig2wiq

    format_only=True)

  File "/Users/bingnanli/git/DANPOS3/wiq.py", line 94, in qnorwig

    rawsort(ifile=ifile,sort_ofile=opath[:-3]+'sort.wiq',gfile=gfile,format=iformat,step=step,suppress=suppress,buffer=buffer)

  File "/Users/git/DANPOS3/wiq.py", line 13, in rawsort

    wg=Wig(file=ifile,gfile=gfile,step=step,suppress=suppress)

  File "/Users/git/DANPOS3/wig.py", line 26, in __init__

    if file !="": self.load(file,gfile=gfile,suppress=suppress)

  File "/Users/git/DANPOS3/wig.py", line 995, in load

    self.loadFixed(file,gfile=gfile,suppress=suppress)

  File "/Users/git/DANPOS3/wig.py", line 1056, in loadFixed

    if instep<self.step:nplst[functions.div(pos*instep,self.step)]+=lst[pos] ########## add by kaifu on Sep 6, 2012 ##########

IndexError: index 23021 is out of bounds for axis 0 with size 23021

The first part of my test.wig file 

fixedStep chrom=I start=1 step=1 span=1

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Chromatin size

I       230218

II      813184

III     316620

IV      1531933

V       576874

VI      270161

VII     1090940

VIII    562643

IX      439888

X       745751

XI      666816

XII     1078177

XIII    924431

XIV     784333

XV      1091291

XVI     948066

M       85779

thanks a lot for you help

Bingnan