I've only worked with the d3.nest() method a few times in the past and took a moment to review the following site:
http://bl.ocks.org/phoebebright/raw/3176159/ What I did notice was that no examples were provided that used sortValues AFTER a rollup() was called. So I added a console.log within the sortValues method as so: .sortValues(function(a,b) { console.log("in sortValues"); return a.summe- b.summe}) and noticed that there was no output so I'm assuming its not kicking that method off for some reason. The workaround i provided uses .sort() and worked fine the data set provided on that page. Hope this helps...
var nested_data = d3.nest()
.key(function(d) { return d.status; })
.rollup(function(values) { return { summe: d3.sum(values, function(d) {return d.time })}})
.entries(data)
nested_data.sort(function(a,b) { return a.values["summe"] - b.values["summe"]})
Joe