Error should be fixed

[Rick Giuly]

Hi Kurt, the error should now be fixed. New version is online.

Changed this file only:
http://code.google.com/p/cytoseg/source/browse/trunk/cytoseg/data_viewer.py

-Rick

kurt weiss wrote:
> Hi Rick, thanks for the info on balancing examples, etc. That all makes
> more sense now! I have new question for you. I did the run with 1500
> mito examples and 4500 other examples(output of my test stack looked
> better, more examples do increase accuracy). I had run this before on a
> small data set to check the output, and everything worked fine. Then I
> did 15 simultaneous runs and oddly about half finished with no problems
> and the other half ended in this EOFError. What does it mean? (I put the
> end of the run at the bottom and the entire terminal output is
> attached). Also of interest, maybe, I restarted one such failed run with
> only --step3, so far its running fine, but it has not yet completed.
> Another possible hint, I was running the computer at near memory
> capacity (18 cores, 16 terminals running). Thanks again,
> Kurt
>
> o9c/unfilteredContourOutput_numContours=02/composite/output006.jpg
> o9c/unfilteredContourOutput_numContours=02/composite/output007.jpg
> o9c/unfilteredContourOutput_numContours=02/composite/output008.jpg
> finished step 2013-03-03 23:45:43.858147
> starting step 2013-03-03 23:45:43.858198
> configFile /home/sleep/cytoseg-read-only/cytoseg/testing/settings2.py
>
> children types
> <type 'instance'>
> <type 'instance'>
> Traceback (most recent call last):
> File "run_pipeline_test.py", line 388, in <module>
> contourStepSet()
> File "run_pipeline_test.py", line 151, in contourStepSet
> contourChunkSize)
> File "../batch_process.py", line 126, in batchProcessContours
> runSteps(**params)
> File "../run_steps.py", line 114, in runSteps
> guiVisible=guiVisible)
> File "../segmentation_manager.py", line 55, in __init__
> self.dataViewer = ClassificationControlsFrame(makeClassifyGUITree(),
> File "../cytoseg_classify.py", line 121, in makeClassifyGUITree
> rootNode = makeDefaultGUITree()
> File "../data_viewer.py", line 2331, in makeDefaultGUITree
> loadedData = cPickle.load(f)
> EOFError
> sleep@ubuntu1204:~/cytoseg-read-only/cytoseg/testing$
>
>
> --
> .