Re: [cytoscape-helpdesk] Find node shape

[Jason Montojo]

Hi Khaled,

That's a bug in the current release.  It currently affects apps that are created using the simple method.  One workaround is to use the OSGi/bundle method to make an app.  In the meantime, we can fix this issue for the next release, which is currently scheduled for October.

Thanks,

Jason

On Sat, May 11, 2013 at 12:17 AM, Khaled <khaled...@gmail.com> wrote:

Hi,

I want to find the shapes of all nodes in a network, here is the code I wrote:

public class MenuAction extends AbstractCyAction {

private CyAppAdapter adapter;

public MenuAction(CyAppAdapter adapter) {

super("Save node color and shape", adapter.getCyApplicationManager(),

"network", adapter.getCyNetworkViewManager());

this.adapter = adapter;

setPreferredMenu("Layout");

}

@Override

public void actionPerformed(ActionEvent e) {

CyApplicationManager manager = adapter.getCyApplicationManager();

CyNetworkView networkView = manager.getCurrentNetworkView();

NodeShape shape;

for (View<? extends CyIdentifiable> nodeView : networkView.getAllViews())

shape = nodeView.getVisualProperty(BasicVisualLexicon.NODE_SHAPE);

}

}

However, this code always throws "java.Lang.NoClassDefFoundError: org/cytoscape/view/presentation/property/values/NodeShape" exception in thread "AWT-EventQueue-0" what am I doing wrong here?

Thank you,

Khaled

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[Khaled]

Thank you a lot

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