Integrating Cytoscape into a Web Page??

[Marco]

Hi, I'm an Italian student, currently I use cytoscape for build
cooccurrent protein network but I would also integrate(construction
and visualization of networks)cytoscape in a web application(only in a
web page), is it possible?
I try to search information and read wiki,for example I think that
this link (http://www.cytoscape.org/cgi-bin/moin.cgi/
Integrating_Cytoscape_into_a_Web_Page)can explain more but I have a
problem everytime I try to open this wiki because I receive the
message "Internal Server Error...".
The final question is, Is possible to integrate cytoscape in a web
application?

Thanks, Marco

[Maital Ashkenazi]

Hi Marco,

On Wed, Nov 11, 2009 at 12:30 PM, Marco <marchia...@gmail.com> wrote:

Hi, I'm an Italian student, currently I use cytoscape for build
cooccurrent protein network but I would also integrate(construction
and visualization of networks)cytoscape in a web application(only in a
web page), is it possible?
I try to search information and read wiki,for example I think that
this link (http://www.cytoscape.org/cgi-bin/moin.cgi/
Integrating_Cytoscape_into_a_Web_Page)can explain more but I have a
problem everytime I try to open this wiki because I receive the
message "Internal Server Error...".

We are experiencing difficulties with wiki pages for the past week. We are working on fixing this problem. In the meanwhile, you can use search engine cached pages.
 

The final question is, Is possible to integrate cytoscape in a web
application?

Yes, this is possible using a Java web start. Here are the detailed steps in a cached wiki page:
http://209.85.129.132/search?q=cache:StKTLYkXXMoJ:www.cytoscape.org/cgi-bin/moin.cgi/Cytoscape_via_Java_Web_Start+Cytoscape_via_Java_Web_Start&cd=1&hl=en&ct=clnk

This page illustrates the use of web start do launch Cytoscape:
http://www.pathwaycommons.org/pc/cytoscape.do


Hope this helps,
Maital
 

Thanks, Marco

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[Johannes]

thats what i wrote :)

On Nov 12, 9:04 pm, Maital Ashkenazi <maita...@gmail.com> wrote:
> Hi Marco,
>

> On Wed, Nov 11, 2009 at 12:30 PM, Marco <marchiaro.ma...@gmail.com> wrote:
> > Hi, I'm an Italian student, currently I use cytoscape for build
> > cooccurrent protein network but I would also integrate(construction
> > and visualization of networks)cytoscape in a web application(only in a
> > web page), is it possible?
> > I try to search information and read wiki,for example I think that
> > this link (http://www.cytoscape.org/cgi-bin/moin.cgi/
> > Integrating_Cytoscape_into_a_Web_Page)can explain more but I have a
> > problem everytime I try to open this wiki because I receive the
> > message "Internal Server Error...".
>
> We are experiencing difficulties with wiki pages for the past week. We are
> working on fixing this problem. In the meanwhile, you can use search engine
> cached pages.
>
> > The final question is, Is possible to integrate cytoscape in a web
> > application?
>
> Yes, this is possible using a Java web start. Here are the detailed steps in

> a cached wiki page:http://209.85.129.132/search?q=cache:StKTLYkXXMoJ:www.cytoscape.org/c...

[Johannes]

http://www.google.com/search?hl=en&client=firefox-a&rls=com.ubuntu%3Aen-US%3Aofficial&hs=DF5&q=cytoscape+integrating+into+webpage&btnG=Search&meta=&aq=f&oq=

simply use the "cached" site under the search result for now

cheers