Re: Tutorial or documentation for Pinnacle Z

[Samad Lotia]

Hi Pavanish,

Here is the documentation for PinnacleZ, which explains how it works and what kind of inputs it needs.

http://chianti.ucsd.edu/~slotia/pinnaclez/help.html

If you'd like sample input files, let me know.

Samad

On Sunday, October 14, 2012 11:11:14 PM UTC-7, pavanish kumar wrote:

I wanted to use Pinnacle Z plugin to analyses my gene expression data, but i could not find any tutorial for it, as i see tutorials for many apps below the download window. I will be using the Cytoscape for the first time. I am a pure biologist with no knowledge of scripting  language. I have read the article authored by Dr.Han-Yu Chuang and wanted to do the similar subnetwork based classification of disease conditions. If any documentation or tutorials is available for this plugin or app please let me know the link to it. I will highly appreciate the help.

Pavanish Kumar
Research fellow
Singapore immunology network
Singapore

[pavanish kumar]

Hi Samad

Thank you very much.