ClueGO results table has identical annotation terms

[nivedas...@gmail.com]

Hi,

I ran ClueGO with the option of GO term fusion enabled. Despite this I see exactly identical terms in the result table having GO-biological process as a source (see example below). 

GOID	GOTerm	Ontology Source	Term PValue	Term PValue Corrected with Bonferroni step down	Group PValue	Group PValue Corrected with Bonferroni step down	GOLevels	GOGroups	% Associated Genes	Nr. Genes	Associated Genes Found
GO:0042730	fibrinolysis	GO_BiologicalProcess-EBI-UniProt-GOA_27.02.2019_00h00	0.00	0.00	0.00	0.00	[4, 5, 6, 7, 8, 9]	Group4	14.29	5.00	[F2, FGA, FGB, FGG, SERPING1]
GO:0042730	fibrinolysis	GO_BiologicalProcess-EBI-UniProt-GOA_27.02.2019_00h00	0.00	0.00	0.00	0.00	[4, 5, 6, 7, 8, 9]	Group5	14.29	5.00	[F2, FGA, FGB, FGG, SERPING1]

It looks like the GO groups are different, but everything else remains the same. Is there any other way I can keep only the unique GO terms in my result? Thanks!

[Bernhard]

Hi Niveda, yes this happens because this term is part of both GO groups 4 and 5 but you can export the node table via cyREST from Cytoscape directly to get the unique information.

Best