Question about Cytoscape Web Integration

[Benkai_Debussy]

Hi, my name is Zachary Sloan at UTHSC. I'm currently involved with the
website www.genenetwork.org. Right now we have a Network Graph
function that uses GraphViz to generate graphs, but I was thinking of
trying to switch over to Cytoscape due to the better quality of
figures generated and its general prevalence of use in the
bioinformatics community.

Is it possible to generate Cytoscape figures from a command-line
argument or to run some applet version of the software? Right now we
have code that generates the dot file GraphViz uses based upon the
user's input that then runs one of GraphViz's algorithms from the
command line to generate an image (which is then displayed on the
website). I haven't been able to find much info about this sort of web
integration. Thanks.