Nodes show as squares when importing David as enrichmentMap

14 views
Skip to first unread message

Shawn Cho

unread,
Apr 28, 2017, 4:29:12 PM4/28/17
to cytoscape-helpdesk
Hi, 

Not sure if this is happen only to me, but my nodes appear as squares upon import. This is strange because it's pretty inconsistent when it happens - some networks I import will be perfectly OK circles, but then the next won't be.

Anyone know if this is a graphics issue?

Thanks!

Shawn
node-squares.png

Scooter Morris

unread,
Apr 28, 2017, 4:31:41 PM4/28/17
to cytoscape...@googlegroups.com
Hi Shawn,
    No, it's a "level of detail" issue.  If you zoom in, they should revert to circles.  The displayed level of detail is based on the number of nodes and edges currently visible on the screen.  To disable level of detail, do a "View->Show Graphics Details".

-- scooter
--
You received this message because you are subscribed to the Google Groups "cytoscape-helpdesk" group.
To unsubscribe from this group and stop receiving emails from it, send an email to cytoscape-helpd...@googlegroups.com.
To post to this group, send email to cytoscape...@googlegroups.com.
Visit this group at https://groups.google.com/group/cytoscape-helpdesk.
For more options, visit https://groups.google.com/d/optout.


Shawn Cho

unread,
Apr 28, 2017, 7:08:34 PM4/28/17
to cytoscape-helpdesk
Ah, thanks Scooter. I had to be more stringent with the cutoff scores to get the nodes displaying as bubbles.

Thanks!

Shawn
Reply all
Reply to author
Forward
0 new messages