Converting graphviz files(dot) to GML

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rOBERT

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Apr 29, 2008, 3:43:58 PM4/29/08

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Does anyone know of a way of converting graphviz files into a format
cytoscape can read? Thanks

Mike Smoot

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Apr 29, 2008, 4:14:26 PM4/29/08

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I've attached a little Perl script that I've used to extract the topology of a network from a dot file and print it to stdout. Eventually, I'd like to see a proper dot parser, but I don't think that's terribly high on the priority list right now.

Mike

On Tue, Apr 29, 2008 at 12:43 PM, rOBERT <rk...@virginia.edu> wrote:

Does anyone know of a way of converting graphviz files into a format
cytoscape can read? Thanks

--
____________________________________________________________
Michael Smoot, Ph.D. Bioengineering Department
tel: 858-822-4756 University of California San Diego