Enrichment Map 1.2 Release

[Ruth Isserlin]

Hi, 

A new version of the Enrichment Map Plugin has been released.  

New features include (http://baderlab.org/EnrichmentMap/ReleaseNotesv1.2):

  * Ability to compare enrichment results from two different species or two different expression platforms. Overlaps are created for each expression set separately. 

  * Creation of Enrichment maps based solely on a gene set file (for large gmt files requires a lot of memory)

  * New similarity metric using combined overlap and jaccard coefficient based on a constant K defined by the user.

  * Added Bingo file support (http://www.psb.ugent.be/cbd/papers/BiNGO/Home.html)

  * Added ability to view gene in each geneset even if an expression file has not been loaded.

  * Added elementary support for exporting heatmap view as pdf (in addition to being able to export a text file).

  * Bulk Enrichment map creation - designed for multiple GSEA results where an EM is wanted for each GSEA run. Using the rpt file of each GSEA result a Cytoscape session with the Enrichment Map and a pdf of each network is generated

  * Bug fixes

Enrichment Map v1.2  is available for download from  the plugin browser or our website (http://baderlab.org/Software/EnrichmentMap).

Thanks, 

Ruth Isserlin