Build failed error

[Ritisha Laungani]

Hello,

I have been trying to setup the Cytoscape code on my Eclipse but have been unable to do so!

This is a part of the error text which i get when i try to build pom.xml using maven-

[ERROR] Failed to execute goal on project cytoscape: Could not resolve dependenc
ies for project org.cytoscape.app-developer:cytoscape:pom:3.0.0-M4-SNAPSHOT: The
 following artifacts could not be resolved: org.cytoscape.distribution:cytoscape
:zip:3.0.0-M4-SNAPSHOT, org.cytoscape:app-api:jar:javadoc:3.0.0-alpha8-SNAPSHOT:
 Could not transfer artifact org.cytoscape.distribution:cytoscape:zip:3.0.0-M4-2
0120321.013427-349 from/to cytoscape_snapshots (http://cytoscape.wodaklab.org/ne
xus/content/repositories/snapshots/): Connection to http://cytoscape.wodaklab.or
g refused: Connection timed out: connect -> [Help 1]

I have already fixed the <proxy> in settings.xml. Can anyone help me fix this?

Thanks!

Ritisha

[Ritisha Laungani]

Are we supposed to make any changes in the <servers>? if yes, what is the id. username and password field supposed to be?

[Jason Montojo]

Hi Ritisha,

You shouldn't have to change anything in the servers section.  It looks like the server is unreachable from your location.  I've updated the pom.xml file so that it points directly to our Maven repository.  Can you do an "svn update" on your working copy and try the build again?

Thanks,

Jason

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[Ritisha Laungani]

Hello Jason,

I still couldn't build it. I did a complete redo of Checkout Maven projects from SCM and then tried to built it again! I am getting the following errors-

[INFO] Scanning for projects...
[INFO]                                                                        
[INFO] ------------------------------------------------------------------------
[INFO] Building Distribution 3.0.0-M4-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO]
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ cytoscape ---
[INFO]
[INFO] --- maven-dependency-plugin:2.2:unpack (unpack-cytoscape) @ cytoscape ---
SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder".
SLF4J: Defaulting to no-operation (NOP) logger implementation
SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.
Downloading: http://repo1.maven.org/maven2/org/codehaus/plexus/plexus-utils/1.4.5/plexus-utils-1.4.5.pom
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Downloading: http://repo1.maven.org/maven2/org/apache/maven/maven-plugin-registry/2.0.8/maven-plugin-registry-2.0.8.pom
Downloaded: http://repo1.maven.org/maven2/org/apache/maven/maven-plugin-registry/2.0.8/maven-plugin-registry-2.0.8.pom (2 KB at 1.8 KB/sec)
Downloading: http://download.java.net/maven/2/org/apache/maven/shared/maven-common-artifact-filters/1.2/maven-common-artifact-filters-1.2.pom
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Downloading: http://repo1.maven.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.2/maven-common-artifact-filters-1.2.pom
Downloaded: http://repo1.maven.org/maven2/org/apache/maven/shared/maven-common-artifact-filters/1.2/maven-common-artifact-filters-1.2.pom (5 KB at 1.9 KB/sec)
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[WARNING] The POM for org.apache.maven.shared:maven-plugin-testing-harness:jar:1.1 is invalid, transitive dependencies (if any) will not be available, enable debug logging for more details
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Downloading: http://repo1.maven.org/maven2/org/apache/maven/shared/maven-invoker/2.0.7/maven-invoker-2.0.7.pom
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Downloading: http://repo1.maven.org/maven2/org/apache/maven/shared/maven-shared-components/8/maven-shared-components-8.pom
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Downloading: https://oss.sonatype.org/content/repositories/ops4j-snapshots/org/apache/maven/maven-parent/7/maven-parent-7.pom
Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/releases/org/apache/maven/maven-parent/7/maven-parent-7.pom
Downloading: http://repo1.maven.org/maven2/org/apache/maven/maven-parent/7/maven-parent-7.pom
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Downloading: http://download.java.net/maven/2/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.pom
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Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/releases/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.pom
Downloading: http://repo1.maven.org/maven2/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.pom
Downloaded: http://repo1.maven.org/maven2/org/codehaus/plexus/plexus-utils/1.4.7/plexus-utils-1.4.7.pom (3 KB at 2.5 KB/sec)
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 20:21.873s
[INFO] Finished at: Sat Mar 24 19:43:07 IST 2012
[INFO] Final Memory: 13M/139M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-dependency-plugin:2.2:unpack (unpack-cytoscape) on project cytoscape: Execution unpack-cytoscape of goal org.apache.maven.plugins:maven-dependency-plugin:2.2:unpack failed: Plugin org.apache.maven.plugins:maven-dependency-plugin:2.2 or one of its dependencies could not be resolved: Failed to collect dependencies for org.apache.maven.plugins:maven-dependency-plugin:jar:2.2 (): Failed to read artifact descriptor for org.apache.maven:maven-plugin-api:jar:2.0: Could not transfer artifact org.apache.maven:maven-plugin-api:pom:2.0 from/to ops4j-snapshots (https://oss.sonatype.org/content/repositories/ops4j-snapshots): java.net.ConnectException: null to https://oss.sonatype.org/content/repositories/ops4j-snapshots/org/apache/maven/maven-plugin-api/2.0/maven-plugin-api-2.0.pom: UnresolvedAddressException -> [Help 1]
[ERROR]
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR]
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/PluginResolutionException

[Neil Dhruva]

Hi all,

I skipped the javadocs and tests using:

mvn install -Dmaven.javadoc.skip=true -Dmaven.test.skip=true

and it worked very well.

Neil

On Sat, Mar 24, 2012 at 1:32 AM, Jason Montojo <jrr...@gmail.com> wrote:

I

[Jason Montojo]

Hi Ritisha,

The error you pasted below indicates your computer is having trouble connecting to the Sonatype server, which is where some of our dependencies are stored.  Can you run "mvn -U dependency:resolve" and see if that works?  Also, are you behind a proxy server or a firewall that restricts which websites you can connect to?

Thanks,

Jason

[Jing Lu]

Hi Jason,

If I work on windows, how could I run "mvn -U dependency:resolve"? Could I do that in eclipse?

Thanks,

Jing

Jason

<div class=

...

[Jason Montojo]

Hi Jing,

Eclipse calls that for you automatically whenever you change your pom.xml.  However, if you want to do it explicitly, right click on your project and select "Run As -> Maven Build...", then under "Goals:" put "-U dependency:resolve".

Hope this helps,

Jason

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