XGMML Linkout Example

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Mark Fortner

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May 23, 2013, 10:55:03 AM5/23/13
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I have a simple XGMML network that I generated via a script and I'd like to add linkouts to different sites.  Does anyone have a simple example of a single node with a linkout?

Regards,

Mark Fortner

PS a number of links on the XGMML wiki page are broken.

Alexander Pico

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May 31, 2013, 1:57:00 PM5/31/13
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Hi Mark,

Linkouts are set in cytoscape session properties, not in the xgmml. Here's how they work:


These ultimately are stored in a linkout.props file, which you could programmatically write and package with an xgmml in a .cys file (a zip of session files). You can unzip a sample .cys file to see all the components, then just replace the linkout.props and xgmml.

 - Alex
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