Re: [Cytoscape-discuss] Find a node inside a net with its name only

[Gang Su]

I don't exactly know what you want to do, but you may just iterate
over all the nodes:

Cytoscape.getCurrentNetwork().getNodeIndicesArray()

On Fri, Nov 13, 2009 at 6:05 AM, Franktwis <francesco...@gmail.com> wrote:
> Hi,
> how can I find a node inside a net I've build? I used the following
> functions to create N nodes and add them to the net.
>
> CyNode node0 = Cytoscape.getCyNode("rain", true);
> cyNetwork.addNode(node0);
>
>
> then I want, in another method, create associations between two
> nodes..
> CyEdge edge0 = Cytoscape.getCyEdge(node0, node1,
> Semantics.INTERACTION, "pp", true);
> cyNetwork.addEdge(edge0);
>
>
> but... how can I find node0 and node1 in another function having only
> the CyNetwork object?
>
> I have only the name of the node (ie. Rain) but how can I find a node
> in a net with his name only? I cannot find functions in Cytoscape and
> CyNetwork classes doing this.
>
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