r8584 - in cytoscape/trunk/testData: . annotation

[cytoscape...@cytoscape.org]

Author: kono
Date: 2006-10-26 18:03:21 -0700 (Thu, 26 Oct 2006)
New Revision: 8584

Added:
cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.txt
cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.xls
cytoscape/trunk/testData/galSubnetwork.sif
Log:
Test data files for attribute table import.

Added: cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.txt
===================================================================
--- cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.txt 2006-10-27 00:26:09 UTC (rev 8583)
+++ cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.txt 2006-10-27 01:03:21 UTC (rev 8584)
@@ -0,0 +1,14 @@
+ID ID in SGD alias Description of Genes Date Sample Boolean Attr2 gal1RGexp gal1RGsig
+YOR167C S000005693 "RPS28A, RPS33A, YOR167C" ribosomal protein S28A (S33A) (YS27) 20010118 TRUE -0.374 2.73E-06
+YOL149W S000005509 "DCP1, YOL149W" 20010124 FALSE 0.228 9.08E-05
+YNR050C S000005333 "LYS13, LYS9, YNR050C" 20020930 FALSE 0.223 1.18E-05
+YNL050C S000004995 YNL050C 20030422 FALSE 0.301 1.43E-05
+YMR138W S000004746 "CIN4, GTP1, UGX1, YMR138W" GTP-binding protein 20010118 TRUE 0.414 0.037256
+YLR264W S000004254 "RPS28B, RPS33B, YLR264W" ribosomal protein S28B (S33B) (YS27) 20010118 TRUE -0.259 1.61E-04
+YLR109W S000004099 "AHP1, YLR109W, cTPxIII" alkyl hydroperoxide reductase 20020411 TRUE -0.603 1.48E-09
+YJR022W S000003783 "LSM8, YJR022W" snRNP protein 20020620 TRUE 0.059 0.6011
+YHR141C S000001183 "MAK18, RPL42B, YHR141C" ribosomal protein L42B (YL27) (L41B) (YP44) 20010118 TRUE -0.359 7.74E-07
+YER112W S000000914 "LSM4, SDB23, USS1, YER112W" U6 snRNA associated protein 20050222 TRUE 0.193 7.05E-05
+YDR277C S000002685 "BPC1, DGT1, HTR1, MTH1, YDR277C" Msn3p homolog (61% identical) 20020408 TRUE 0.243 2.19E-05
+YDL194W S000002353 "SNF3, YDL194W" glucose sensor 20021003 TRUE 0.139 0.018043
+YBL026W S000000122 "LSM2, SMX5, SNP3, YBL026W" "snRNA-associated protein, Sm class" 20050222 TRUE -0.032 0.48423

Property changes on: cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.txt
___________________________________________________________________
Name: svn:executable
+ *

Added: cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.xls
===================================================================
(Binary files differ)

Property changes on: cytoscape/trunk/testData/annotation/galSubnetworkAnnotation2.xls
___________________________________________________________________
Name: svn:executable
+ *
Name: svn:mime-type
+ application/octet-stream

Added: cytoscape/trunk/testData/galSubnetwork.sif
===================================================================
--- cytoscape/trunk/testData/galSubnetwork.sif 2006-10-27 00:26:09 UTC (rev 8583)
+++ cytoscape/trunk/testData/galSubnetwork.sif 2006-10-27 01:03:21 UTC (rev 8584)
@@ -0,0 +1,15 @@
+YBL026W pp YOR167C
+YMR138W pp YLR109W
+YMR138W pp YHR141C
+YJR022W pp YNR050C
+YJR022W pp YOR167C
+YJR022W pp YNL050C
+YJR022W pp YLR264W
+YER112W pp YOR167C
+YDR277C pp YJR022W
+YDR277C pp YDL194W
+YOL149W pp YOR167C
+YNR050C pp YMR138W
+YLR264W pp YBL026W
+YLR264W pp YOL149W
+YLR264W pp YER112W