Download LD matrices into HPC

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Frida Lona

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Oct 23, 2025, 9:56:58 AM (10 days ago) Oct 23
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Hello!

Thanks for developing cTWAS, I am looking forward into integrating it into my analyses!
I am trying to run it with GWAS sumstats derived from UKB white British (hg38) and with the PredictDB weights. I would like to take advantage of the LD matrices from UKB you have generated, but I was wondering if there is a way to automatically download them into the HPC I am using from Box (like with wget), but I can't find a download link for that. Otherwise, I'd need to download them locally and then transfer, but since the files are so large, I'd prefer to avoid that.

Thank so much for any advice you might have!

Frida
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