updating hg38 annotation

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Erik Dassi

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May 24, 2023, 10:14:47 AM5/24/23
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Hi,
is there a script to update/regenerate the hg38 annotation? I noticed that some gene names have been changed since the original annotation was prepared and I would like to fix this
thanks a lot
Erik

Chaolin Zhang

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May 24, 2023, 11:21:41 AM5/24/23
to Erik Dassi, CTK User Group, Suvrajit Maji
Hi Erik,

We will definitely try.  For now, I suggest you use the gene ID to retrieve the updated gene symbol.  We actually prefer to use gene ID than gene symbol because they are more stable.

Hope this helps!

Chaolin



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Erik Dassi

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May 25, 2023, 1:51:11 AM5/25/23
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Dear Chaolin, many thanks for your reply. That is indeed a very useful suggestion!
thanks a lot again
Erik

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