firstly check whether the same company falls under the amended definition of small company then try filling form MGT-7A, wherein you can avoid certification fields.
To the same form after making necessary comments to the field whether the company has made compliances and disclosures in respect of applicable provisions................... (NO)
If No, give the reasons/observations
Mention the same as observation/reason and if the said pvt company does not fall under the definition of small company then on (form MGT-7) the same can be certified after mentioning the reasons.