can atoms be fixed in NEB calculations in cp2k?

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anyu...@gmail.com

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Feb 15, 2018, 5:35:45 AM2/15/18
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Dear all,

I want to fix some atoms in CI-NEB calculations with cp2k by using "CONSTRAINT FIXED_ATOMS", however, the results show that the atoms I want to fix changed there positions a lot. For example, in my input file, I want to fix two O atoms, but the results shown they are not fixed at all. So far, I hadn't find the solution.

Could anyone please help to see where are the errors? Thanks a lot in advance.

Best,
Yun
NEB.inp
Feb9_start.xyz
NEB-pos-Replica_nr_4-1.xyz

Maxime Van den Bossche

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Feb 17, 2018, 4:34:39 PM2/17/18
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Dear Yun,

I'm just a regular CP2K user, but I have some experience running
such calculations and can just give you these suggestions:

- Have you searched for similar topics in this group? E.g. this one:
https://groups.google.com/forum/#!topic/cp2k/WE5T3HgGSAc

- Could you turn your fairly convoluted input and structure into
a more minimal example, e.g. just H2 dissociation with standard DFT,
with one H atom fixed? That would make it easier for other people
to understand and help out with your issue, and you may even already
find a solution just by doing this.

- I'm actually using the ASE interface to CP2K to run NEB calculations
(see e.g. https://www.cp2k.org/tools:ase). Using the FixAtoms constraints
in ASE, I have no problems keeping atoms fixed during a NEB run. So
this is an alternative in case the "pure CP2K approach" turns out to
be problematic.

Best,
Maxime



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