XTB NVT simulation for AL-MOF with low vs high loading of water

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Alex Lyu

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Sep 30, 2025, 8:56:21 AM (yesterday) Sep 30
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Hi all,
I am trying to run an NVT XTB simulation of a MOF structure where the pores and channels were filled with MOFs. I managed to successful do this with low amount of water (1904 atoms) and each MD step takes about 43s and around 3 iterations to converge. However, when I do my high water loading (2004 atoms), its ow taking roughly 180s and 16 iterations to converge. I am not sure what is wrong, I am using an identical md.itp file.

I have attached my md.itp and xyz file for the high loading, it would be great if someone can explain to me how to speed up this process.

many thanks,
Stefani
coord.xyz
md.inp
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