Expecting %FORMAT. Not found! Abort reading of AMBER topology file!

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Andy Danian Zapata Escobar

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Feb 5, 2022, 3:27:11 PM2/5/22
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Hello Everyone

I had a problem with the topology file. I use Amber21 (tleap) to make .prmtop.

I get this error (I am working with the protein 5GR9)

 *******************************************************************************
 *   ___                                                                       *
 *  /   \                                                                      *
 * [ABORT]                                                                     *
 *  \___/  Expecting %FORMAT. Not found! Abort reading of AMBER topology file! *
 *    |                                                                        *
 *  O/|                                                                        *
 * /| |                                                                        *
 * / \                                                   topology_amber.F:1328 *
 *******************************************************************************


Thank you in advance!

Andy

Andy Danian Zapata Escobar

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Feb 5, 2022, 5:37:42 PM2/5/22
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I solve the problem

AmberTools add some flags into .prmtop, which are

%FLAG CMAP_COUNT

%FLAG CMAP_RESOLUTION

%FLAG CMAP_PARAMETER_01

%FLAG CMAP_PARAMETER_02

%FLAG CMAP_PARAMETER_03

%FLAG CMAP_PARAMETER_04

%FLAG CMAP_PARAMETER_05

%FLAG CMAP_PARAMETER_06

%FLAG CMAP_PARAMETER_07

%FLAG CMAP_PARAMETER_08

%FLAG CMAP_PARAMETER_09

%FLAG CMAP_PARAMETER_10

%FLAG CMAP_PARAMETER_11

%FLAG CMAP_PARAMETER_12

%FLAG CMAP_PARAMETER_13

%FLAG CMAP_PARAMETER_14

%FLAG CMAP_INDEX


When, I eliminate these section into .prmtop, cp2k will run without errors
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