Dear Ebad,
Regarding the former of your two emails: is this the whole output file? Because the calculation did not terminate properly. That's why the printing of the .pdos files didn't happen. I have just run the same input file with the precompiled serial version of CP2K 4.1 I have on my workstation, and it finished properly, and printed the .pdos files. Take a look at the attached output and compare to yours -- they are virtually identical up until line 544 of my output, where your output suddenly stops.
Are you sure your executable is well compiled? Could you try with a different compilation, or on a different machine? Do other calculations finish successfully, is this issue just related to this one?
Yours sincerely,
Patrick Gono