COPASI User Forum

Hello Carlotta, you might not have gotten the mail i sent to you privately before. Your parameter

Hi Jikson, I'd like to add to Frank's reply. The error message in the first snapshot says the

24 th CCB Workshop Feb. 13-15, 2023 The workshop is free. However, to be admitted please email the

Hello Daniel, Thank you so much for the files, this turns out to be a documentation issue. That is,

Hello Pedro, Thank you alot! This helped me big time. Best Celvic pedro.mendes schrieb am Freitag, 2.

Hello Jikson, Please have look at the reactions. Since the second reaction has non- integer

Dear Community members, Hope you are doing well and good. We recently launched the 'Model of the

Hello, the parameter scan task uses the time course task, so to adjust duration and all other

Hello, in your model you have many species that begin with an initial value of 0. The delta minimum

Dear All, The following set of reactions are present in our model, I ran the steady-state analysis

Hello Deepa * for an event to fire at the initial time .. you have to click on the checkbox, Fire at

Thanks Frank, I've just downloaded and have had a quick go - it looks good. Thanks for the quick

Hello Sven, thank you very much, this helped me now I have a clue on how to debug. Best! sven....@

Since these are correlations, you want numbers near zero. Near +1 means they are positively

Hello Mathias, The check for appropriate units has been improved however an incorrect message was

I figured out the problem: I have to paste 'writeSBML({})' command after the model generation

Hi Stefan, Thank you so much for the clarification. Best, Deepa On Fri, Oct 14, 2022 at 2:32 AM '

Following up on this: I am actually struggling to reproduce the kinetic parameters of a study for my

Dear all, I'm using COPASI to analyze the metabolism of one compound by two enzymes. I also use

Hi Frank, It does indeed work! I just noticed a syntax error in my code and fixed it. Thanks! On

As a starting point just look for correlations among the parameters. Often you get strong

Hello Parvathy, I would probably model this as two reactions: v1: A -> B v2: A -> C where you

Hi Frank, I actually solved the issue, I forgot to run the process method for the MCA method before

Hi Stefan and Frank, I can confirm that this works: I can start CopasiUI after removing that file.

Hi Stefan, Thank you very much. I did not realize that I could have this option :-| Regards,

Dear Dr Mendes, Excellent thank you, I will try this! Best, Theo On Friday, July 22, 2022 at 3:28:51

Hello Dr. Stefan, Many thanks for your reply. That makes sense. I will take a look at the video. Best

Hello, * the error in the `glucose transport` reaction comes from the fact, that the rate law uses a

Thanks a lot, my mistake :) On Fri, Jun 17, 2022 at 7:26 AM 'Hoops, Stefan (sh9cq)' via

Hi Prof., Thank you so much for the explanation. Would it be wrong to have a transition time in hours