COPASI User Forum

> I'm getting stuck at finding the concentration as the points on the > plot appear as a

I am afraid your question is more about experimental works in cancerous signaling rather than about

You can express the concentration of your chemical species as mol/m^2 instead of mol/L. This can be

Dear Sven, Thanks a lot for all your help! I was able to fit my steady-state data with Copasi as you

Dear Biologists interested in Modeling, The 24th Annual Workshop on Computational Cell Biology will

Hi All, Say I have 5 species = A, B, C, D, E Reaction Rules - => A => B A => C B => D C

Hello, I can think of another way (with a different set of drawbacks...): You could use the parameter

I guess that the graphical features of Copasi are quite limited as the main purpose of Copasi is not

Thanks a lot, Frank! Best, Janek Frank Bergmann kirjutas kolmapäev, 12. aprill 2023 kl 09:20:31 UTC+3

Hi Jikson, A pseudo-first order reaction is written the same way as a true first-order reaction,

Thanks a lot, Frank! I'll give it a try. Best, Alexandre A 12 de abril de 2023 03:51:39, Frank

Dear Frank Thanks for your reply, as an R user - I'll try CoRC. Thanks! Ben On Wed, 29 Mar 2023

Dear Biologists interested in Modeling, The 24th Annual Workshop on Computational Cell Biology will

Hello Yonatan, you need to set this setting once per model. So it will persist until you load another

After the call to setObjectName, COPASI ensures that all elements referring to the metabolite will be

Dear Frank, Thank you quick reply. Your suggestion is not good for me because target species are used

The best and easiest way would probably to set the hydronium concentration equal to a constant. That

Hello Ken, You may want to have a look at the tutorials: https://copasi.org/Support/Video_Tutorials/

Dear all, Sorry for this question, but I do not know how to move the slider and see the effect on the

Thanks a lot Frank. Best regards, Rodrigo. On Fri, Feb 24, 2023 at 12:10 AM Frank Bergmann <frank.

Many thanks Frank, that is very helpful. I did play with volume and species quantities which makes

Dear users, I saw two examples. First case, component V species belong is automatically multiplied.

Hi Jikson, I'd like to add to Frank's reply. The error message in the first snapshot says the

24 th CCB Workshop Feb. 13-15, 2023 The workshop is free. However, to be admitted please email the

Hello Daniel, Thank you so much for the files, this turns out to be a documentation issue. That is,

Hello Pedro, Thank you alot! This helped me big time. Best Celvic pedro.mendes schrieb am Freitag, 2.

Hello Jikson, Please have look at the reactions. Since the second reaction has non- integer

Dear Community members, Hope you are doing well and good. We recently launched the 'Model of the

Hello, the parameter scan task uses the time course task, so to adjust duration and all other

Hello, in your model you have many species that begin with an initial value of 0. The delta minimum