COPASI User Forum

Dear all, I'm using COPASI to analyze the metabolism of one compound by two enzymes. I also use

Hi Frank, It does indeed work! I just noticed a syntax error in my code and fixed it. Thanks! On

As a starting point just look for correlations among the parameters. Often you get strong

Hello Parvathy, I would probably model this as two reactions: v1: A -> B v2: A -> C where you

Hi Frank, I actually solved the issue, I forgot to run the process method for the MCA method before

Hi Stefan and Frank, I can confirm that this works: I can start CopasiUI after removing that file.

Hi Stefan, Thank you very much. I did not realize that I could have this option :-| Regards,

Dear Dr Mendes, Excellent thank you, I will try this! Best, Theo On Friday, July 22, 2022 at 3:28:51

Hello Dr. Stefan, Many thanks for your reply. That makes sense. I will take a look at the video. Best

Hello, * the error in the `glucose transport` reaction comes from the fact, that the rate law uses a

Thanks a lot, my mistake :) On Fri, Jun 17, 2022 at 7:26 AM 'Hoops, Stefan (sh9cq)' via

Hi Prof., Thank you so much for the explanation. Would it be wrong to have a transition time in hours

Hello Deepa, when running parameter estimation, it is quite common, to get into regions, where

Hello Frank, Thank you so much for helping me progress in the right direction. Deepa On Fri, Jun 10,

Hello Deepa, I replied privately to your question about the parameter estimation setup and the ratio

Hi Prof., Thank you for the clarification, I understand it now. Changing to initial expression helps.

thank you for letting us know. While the main downloads are provided by the github releases. We can

Dear Frank, Thank you for your reply I will send you my model privately Kindly help me in this regard

Dear Dr. Bergmann and Dr. Mendes, Thank you so much for taking your time and sharing your insights

Hello Tejal, just to add to what matthias said. You received a warning message, that no author was

Hello Frank, Thanks a lot for the insight. In the meantime, do you suggest converting the values to

I implemented it! Thank you for clear and detailed instruction! Roma On Monday, 9 May 2022 at 09:50:

Sorry for delayed response. Yeah, everything works now, thank you a lot! Roma On Monday, 9 May 2022

Roma, I've replied to you privately. thanks Pedro On 5/9/22 06:37, Roma Smirnov wrote: > I

Hello Deepa, Thank you for sending the model. COPASI does change your original kinetic "v"

Thank you so much for following up and sending the model, i'll be sure to let you know when this

Now I understood you, you were talking about the C Exporter. And indeed, the ODE exporters (same for

Ok thanks! frank.thom...@gmail.com schrieb am Dienstag, 5. April 2022 um 12:04:30 UTC+2: We have no

Dear Stefan, I will do as you suggest. I' ll tell if it work Thank you, carlos El viernes, 1 de

Ok, just to report back. I found it extremely easy to use the COPASI python bindings in a Heroku