Install Miniconda
Kristen Szmalc
These quick command line instructions will get you set up quickly with the latest Miniconda installer. For graphical installer (.exe and .pkg) and hash checking instructions, see Installing Miniconda.
These three commands quickly and quietly install the latest 64-bit version of the installer and then clean up after themselves. To install a different version or architecture of Miniconda for Windows, change the name of the .exe installer in the curl command.
These four commands quickly and quietly install the latest M1 macOS version of the installer and then clean up after themselves. To install a different version or architecture of Miniconda for macOS, change the name of the .sh installer in the curl command.
These four commands quickly and quietly install the latest 64-bit version of the installer and then clean up after themselves. To install a different version or architecture of Miniconda for Linux, change the name of the .sh installer in the wget command.
On Windows, macOS, and Linux, it is best to install Miniconda for the local user, which does not require administrator permissions and is the most robust type of installation. However, if you need to, you can install Miniconda system wide, which does require administrator permissions.
The graphical installer for MacOS installs Miniconda into /opt/miniconda3 in your file system. If you want to install Miniconda into your Home directory or if you have multiple users on a system and want to manage your installation more carefully, Anaconda recommends the shell (or command line) installer.
As of Anaconda Distribution 2022.05 and Miniconda 4.12.0, the option to add Anacondato the PATH environment variable during an All Users installation has been disabled. Thiswas done to address a security exploit.You can still add Anaconda to the PATH environment variable during a Just Me installation.
My computer memory is nearly out of space, and in going through large packages to clean space I realized that I have miniconda3, taking up 5.71GB, and anaconda3, taking up 4.13GB. I probably did this a few years ago while mindlessly following install instructions for a class. At this point, I understand the merits/drawbacks of each distribution if I were to choose now which one I'd like to install, but I am not sure what exactly would happen if I delete one of these. Any pointers/advice would be appreciated. Thanks!
anaconda-clean --yesAnaconda-Clean creates a backup of all files and directories that might be removed in a folder named .anaconda_backup in your home directory. Also note that Anaconda-Clean leaves your data files in the AnacondaProjects directory untouched. After that has been done, go ahead and do option 1.
I searched around on the internet, but didn't find a solution, so thought I would try installing it anyway just to see what happens. It does not complete the install. I followed the prompts, but at some point, you get this:
Most of what I have found about issues with miniconda (or anaconda) and macOS (Catalina or Big Sur) relates to the differences between bash and zsh and the two extra lines of code that you need to activate miniconda/anaconda. But I can't even get to that point because I cannot get Miniconda installed!
You can also continue the installation with the .pkg installer, but I don't personally like it because it puts it into the /opt/miniconda3 folder by default and it doesn't asks you about the conda init script written into the .zshrc file.
I installed Miniconda and I'm trying to use Jupyter Notebook with it but haven't been able to do so. After installing miniconda I ran the jupyter notebook command on my terminal and jupyter wasn't installed.
This problem has just happened to me as well. My older anaconda environments seem to be working fine but the environments I have created today seem to have this exact issue which throws AttributeError: type object 'IOLoop' has no attribute 'initialized'.
I needed matplotlib in python, and need jupyter working. The package will try to uninstall matplotlib if you uninstall tornado, unless you do a force. But I still need matplotlib, I need that. So I still need to force matplotlib to use the old version of tornado. Turns out I had two tornado versions, one installed by pip, other installed by conda.
By default, miniconda3 recommends put this folder at the front of your $PATH variable, which will effectively replace all the system tools with miniconda3's choices residing in $HOME/miniconda3/bin. If you want to allow this then use this more intrusive configuration in your .zshrc file:
I want the full featured Anaconda (with Spyder) installed for my script development, but then I want to minimize (without Spyder) a frozen version of my application. I'm thinking of also installing Miniconda and installing the bare minimum number of packages that are needed to male my application work (primarily OpenCV, Numpy, and PyQT) and then using cx_Freeze to create a distribution package (using Inno Setup for building a Windows installation package).
Thanks for the responding me, I already go through the web link. But it works for Anaconda complete package. But not for miniconda. I think some additional package it to be install on miniconda before follow the steps mentioned in weblink.
Download install file Miniconda2-latest-Linux-x86_64.sh from , install it from command line. There are some questions need to be taken care of manually, like License, install path and adding binary into $PATH. My question is: is there any way to automatically install it by one command? Such as
I have a new laptop.
I installed Miniconda.
But when I go cmd line and enter python --version, I receive an error message.
Do I need to install Python separately?
It seems from documentation it should be installed with Miniconda.
I've tried downloading miniconda from their website (couldn't find it in the software app),and it goes into the downloads folder like I'd expect, but i'm not sure what to do from there. I've opened it a few times but it just opens in text editor.
I've noticed python 3 is already installed somewhere, altough I can't seem to find the acual location. Regarless, I can poen a python shell in the terminal, I'm not sure if already having python would be interfering with anything.
I have a GTX1650 grafcard, is that to small to run faceswap? I get a error message when installing the software, "cant install miniconda". I have run FS on a 1650 earlier at 256pxs and it was not completely useless.
This is a link to our FAQ page which gives step by step instructions for making sure that you have a clean system that will not have any conflicts installing Faceswap. These are step by step instructions for you to follow. It is not something you are meant to type in. Click on the link and follow the instructions.
You don't need to post images. You need to click the "Show Details" button, as I said in my earlier message. You then need to right click the text in the box and select "Copy". Then you paste the text here.
AND later I changed the conda init to miniconda3/condabin/conda. I created a new environment with python 3.7 in miniconda3/env, and after I activated the new environment and reran the install command, the same error occurred. Could you tell me the reason? many thanks!
If you do want to manage your own conda/FSL environments, we publish FSL packages to a self-hosted conda channel, and we publish FSL releases as conda environment files, which can be installed using the conda env [createupdate] commands.
we need a snippet that helps to create a directory to install miniconda into it,
After we have set up this - then we can start to download the latest python 3 based install script for Linux 64 bit,
that wen very nice.
now we can do even more: the miniconda.sh has got some cool basic options.
Most notably we used -b to be able to run unattended, which means that all of the agreements are automatically accepted without user prompt.
-u updates any existing installation in the directory of install if there is one. -p is the directory to install into.
**Silent/Logged **A quick and easy way to silence everything or to log it to a file during an automated install is to wrap the script into a bash function, or save it to its own file, and call the file. I like the function method since I can still copy it right into a terminal, or keep my install script as one single file.
Can you clarify which version of greta you are running? We resolved a couple of issues where the installation would hang indefinitely, and the most current version should be 0.4.2, which is on CRAN now.
Hi @linsalrob, thanks for reaching out! The large installation size is certainly unfortunate, but right now it is a bit of a necessary evil. Because QIIME 2 involves so many different dependencies, it is pretty important that we keep a close eye on the precise versions of those external tools, otherwise things might start causing trouble for users during analyses!
I tried to run the script as user and as root but with no success.
In my original post, it is runned as a root (at step [/root/miniconda3] >>> /home/osmc/miniconda3 I changed suggested root path to local one).