output names

[Felipe Torquato]

Hi CMS Users,

How can I run the same model 10 times at the same time?

I'm worried because if I do so, all the 10 outputs will be saved with the same name (i.e. con_file_1) in the same directory.

Best,

Felipe

[Shilpa Lal]

Hi Felipe, 

Run it using 10 different expt folders I guess. That way all expt folders will get 1 output each for example one traj_file_1.nc and con_file_1 each. This might make the processing 10x slower though.

Thanks

Shilpa

--
You received this message because you are subscribed to the Google Groups "connectivity-modeling-system-club" group.
To unsubscribe from this group and stop receiving emails from it, send an email to connectivity-modeling-...@googlegroups.com.
To post to this group, send email to connectivity-mod...@googlegroups.com.
For more options, visit https://groups.google.com/d/optout.

[Felipe Torquato]

Hi Shilpa,

thanks for your tip. 

But this is exactly what I wanted to avoid as each expt folder requires a nests folder with the entire oceanographic data.

It would be better if there was a flag in the command line to chose the output name.

  

Em segunda-feira, 6 de maio de 2019 09:34:24 UTC+10, Shilpa Lal escreveu:

Hi Felipe, 

Run it using 10 different expt folders I guess. That way all expt folders will get 1 output each for example one traj_file_1.nc and con_file_1 each. This might make the processing 10x slower though.

Thanks

Shilpa

On Sun, May 5, 2019, 13:08 Felipe Torquato <torqu...@gmail.com> wrote:

Hi CMS Users,

How can I run the same model 10 times at the same time?

I'm worried because if I do so, all the 10 outputs will be saved with the same name (i.e. con_file_1) in the same directory.

Best,

Felipe

--
You received this message because you are subscribed to the Google Groups "connectivity-modeling-system-club" group.

To unsubscribe from this group and stop receiving emails from it, send an email to connectivity-modeling-system-club+unsubscribe@googlegroups.com.
To post to this group, send email to connectivity-modeling-system-cl...@googlegroups.com.

[Robin F]

Hi Felipe,

To avoid duplicating your nest files, you can have all of them in a single location and just link them in each expt folder.

Best,

> Le 5 mai 2019 à 19:57, Felipe Torquato <torqua...@gmail.com> a écrit :
>
> But this is exactly what I wanted to avoid as each expt folder requires a nests folder with the entire oceanographic data.
>

--

Robin Faillettaz, Ph.D
——————————————————————

Postdoctoral Research Fellow
RECOVER2 project
University of Miami
Rosenstiel School of Marine & Atmospheric Science
4600 Rickenbacker Causeway, Miami, FL 33149-1098, USA
Tel: (US) +1-702-910-0380; (FR) +33-6-84-91-43-33
Robin.Fa...@gmail.com
Robin.Fa...@rsmas.miami.edu

[Felipe Torquato]

Thanks Robin,

but how can I link my nest files to a single location.

For example, if I have:

input_directory_1

input_directory_2

input_directory_3

expt_directory_1

expt_directory_2

expt_directory_3

How can I run 'input_directory_1', 'input_directory_2' and 'input_directory_3' linked to a single expt_directory?

Em segunda-feira, 6 de maio de 2019 10:48:46 UTC+10, Robin F escreveu:

Hi Felipe,

To avoid duplicating your nest files, you can have all of them in a single location and just link them in each expt folder.

Best,

> Le 5 mai 2019 à 19:57, Felipe Torquato <torqu...@gmail.com> a écrit :
>
> But this is exactly what I wanted to avoid as each expt folder requires a nests folder with the entire oceanographic data.
>

--

Robin Faillettaz, Ph.D
——————————————————————

Postdoctoral Research Fellow
RECOVER2 project
University of Miami
Rosenstiel School of Marine & Atmospheric Science
4600 Rickenbacker Causeway, Miami, FL 33149-1098, USA
Tel: (US) +1-702-910-0380; (FR) +33-6-84-91-43-33

Robin.F...@gmail.com
Robin.F...@rsmas.miami.edu

[Robin F]

You have to create

input_directory_1
input_directory_2
input_directory_3

AND

expt_directory_1
expt_directory_2
expt_directory_3

But in expt_directory_2/nests, you simply link the nest files from where they are stored (probably in expt_directory_1 in this case) with "ln -s *". And you repeat that for each of your expt_dir_n folder.

Best,

> Le 5 mai 2019 à 20:59, Felipe Torquato <torqua...@gmail.com> a écrit :
>
> Thanks Robin,
>
> but how can I link my nest files to a single location.
>
> For example, if I have:
>
> input_directory_1
> input_directory_2
> input_directory_3
>
> expt_directory_1
> expt_directory_2
> expt_directory_3
>
>
> How can I run 'input_directory_1', 'input_directory_2' and 'input_directory_3' linked to a single expt_directory?

--

Robin Faillettaz, Ph.D
——————————————————————

Postdoctoral Research Fellow
RECOVER2 project
University of Miami
Rosenstiel School of Marine & Atmospheric Science
4600 Rickenbacker Causeway, Miami, FL 33149-1098, USA
Tel: (US) +1-702-910-0380; (FR) +33-6-84-91-43-33

Robin.Fa...@gmail.com
Robin.Fa...@rsmas.miami.edu

[Felipe Torquato]

Thank you, Robin!

Robin.F...@gmail.com
Robin.F...@rsmas.miami.edu