Interesting. I just updated this morning and didn't see your problem
before or after the update:
Before:
-------
[jr on macpro at Desktop]# cc --version
Apple LLVM version 7.0.2 (clang-700.1.81)
Target: x86_64-apple-darwin15.3.0
Thread model: posix
[jr on macpro at Desktop]# cc hello.c -o hello
[jr on macpro at Desktop]# file hello
hello: Mach-O 64-bit executable x86_64
[jr on macpro at Desktop]# ./hello
Hello world.
After:
------
[jr on macpro at Desktop]# cc --version
Apple LLVM version 7.3.0 (clang-703.0.29)
Target: x86_64-apple-darwin15.4.0
Thread model: posix
InstalledDir:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
[jr on macpro at Desktop]# cc hello.c -o hello
[jr on macpro at Desktop]# file hello
hello: Mach-O 64-bit executable x86_64
[jr on macpro at Desktop]# ./hello
Hello world.
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JR