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Import Leica .lif file into MATLAB
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Martin
Mar 26, 2010, 2:06:05 PM3/26/10
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Hi,
I want to import a .lif file generated by Leica microscopy software into MATLAB. These .lif files somethimes comprise more than 100 images. Therefore the best solution would be if I somehow could read in the meta data of the image file and then decide which images I want to load into the software as a matrix in order to not run out of memory.
I want to import a .lif file generated by Leica microscopy software into MATLAB. These .lif files somethimes comprise more than 100 images. Therefore the best solution would be if I somehow could read in the meta data of the image file and then decide which images I want to load into the software as a matrix in order to not run out of memory.
Jamie
Jun 8, 2010, 9:40:25 AM6/8/10
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the best imported I have found is the LOCI suite. The import jode is open-source java, and they have written a working matlab wrapper.
http://www.loci.wisc.edu/bio-formats/matlab
open the linked m-file at the loci website for examples of how to use the bfopen() function.
"Martin " <mf...@gmx-topmail.de> wrote in message <hoit2d$3oa$1...@fred.mathworks.com>...
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