Converting mgf to either raw or mzML

[JAVAN OKENDO]

Dear all,

I am wondering if there is a possibility of converting the MGF file to either RAW or mzML file format and if there is any danger in doing this. Will it compromise the quality of my data?

[Jimmy Eng]

Not possible to convert into vendor native raw formats.  Going from mgf to mzML is fine though ... no data loss issues to worry about (if you're using a functional converter).

[Javan Okendo]

Hi Jimmy,

I am using MSconvert to convert the MGF file to mzML and it is working fine. I was worried about the data loss.

Thanks for clarifying this to me.

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