Hi Tadeusz,
It is generally normal not to have the same size as the original photos since the depth maps have to be computed over a PINHOLE camera model.
Therefore, unless you have chosen the Pinhole model as base settings for your camera, the undistorsion step of the dense reconstruction is dedicated to the transformation of your images into a pinhole model, what is likely to modify the original size of your images.
However the size you mentioned is far less than what may be expected, so be sure to set the max_image_size parameter to -1 (or for instance 6000), in the Stereo tab of Dense reconstruction options.
Cheers,
Pierre-Olivier