Using genome other than human or mouse

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Weixi

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Mar 19, 2020, 7:05:45 PM3/19/20
to CODEX/CODEX2 for CNV detection
Hi,

I am trying to use CODEX2 to detect CNVs among the genome a type of pine tree. My question is how to set this pine tree's genome as the reference genome instead of human or mouse's. 
Thank you!

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Weixi  
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